RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 YDJCA8MPS7 323 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 H7C1D1 291 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 PSMD14O00487 310 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 KCNJ4P48050 445 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 SOX10P56693 466 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 DOK7Q18PE1 504 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 MRPL50Q8N5N7 158 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
CLPTM1-211ENST00000589347 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 CSF1RP07333 972 aa13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 NOGQ13253 232 aa13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 DPF2Q92785 391 aa13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 MINPP1Q9UNW1 487 aa13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 LEMD3Q9Y2U8 911 aa13.37□□□□□ -0.27
CLPTM1-211ENST00000589347 CCDC57Q2TAC2 916 aa13.36□□□□□ -0.27
CLPTM1-211ENST00000589347 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
CLPTM1-211ENST00000589347 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
CLPTM1-211ENST00000589347 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
CLPTM1-211ENST00000589347 PGAP2Q9UHJ9 254 aa13.36□□□□□ -0.27
CLPTM1-211ENST00000589347 CNOT7Q9UIV1 285 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-211ENST00000589347 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
CLPTM1-211ENST00000589347 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
CLPTM1-211ENST00000589347 ZIC5Q96T25 663 aa13.35□□□□□ -0.27
CLPTM1-211ENST00000589347 HTTP42858 3142 aa13.35□□□□□ -0.27
CLPTM1-211ENST00000589347 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
CLPTM1-211ENST00000589347 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
CLPTM1-211ENST00000589347 AGBL3Q8NEM8 1001 aa13.34□□□□□ -0.27
CLPTM1-211ENST00000589347 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
CLPTM1-211ENST00000589347 GLIS2Q9BZE0 524 aaPredicted RBP13.34□□□□□ -0.27
CLPTM1-211ENST00000589347 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
CLPTM1-211ENST00000589347 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
CLPTM1-211ENST00000589347 USP17L3A6NCW0 530 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 USP17L4A6NCW7 530 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 FOXO4P98177 505 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 CHRNDQ07001 517 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 USP17L1Q7RTZ2 530 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 TRPM4Q8TD43 1214 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 CNNM1Q9NRU3 951 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 UTYO14607 1347 aa13.33□□□□□ -0.28
CLPTM1-211ENST00000589347 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
CLPTM1-211ENST00000589347 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
CLPTM1-211ENST00000589347 FAM155AB1AL88 458 aaPredicted RBP13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 TBC1D10BQ4KMP7 808 aaPredicted RBP13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 LDHAL6AQ6ZMR3 332 aa13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
CLPTM1-211ENST00000589347 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 MMP14P50281 582 aa13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 DCPSQ96C86 337 aaKnown RBP13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 AKAP11Q9UKA4 1901 aa13.3□□□□□ -0.28
CLPTM1-211ENST00000589347 SHTN1A0MZ66 631 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 HIRAP54198 1017 aaPredicted RBP13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 HUNKP57058 714 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 MIER1Q8N108 512 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 ZNF408Q9H9D4 720 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 KCNQ5Q9NR82 932 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 MROH5Q6ZUA9 1318 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 PAPPA2Q9BXP8 1791 aa13.29□□□□□ -0.28
CLPTM1-211ENST00000589347 USP17L8P0C7I0 530 aa13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 SULF1Q8IWU6 871 aa13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 GGA3Q9NZ52 723 aa13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
CLPTM1-211ENST00000589347 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 PLIN1O60240 522 aa13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 TAF5LO75529 589 aa13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 RGMBQ6NW40 437 aa13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 KRT26Q7Z3Y9 468 aa13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
CLPTM1-211ENST00000589347 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
CLPTM1-211ENST00000589347 UBE4AQ14139 1066 aa13.26□□□□□ -0.29
CLPTM1-211ENST00000589347 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
CLPTM1-211ENST00000589347 DACT2Q5SW24 774 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms