RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
VPS25-202ENST00000589219 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
VPS25-202ENST00000589219 DBNDD2Q9BQY9 259 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
VPS25-202ENST00000589219 LIMCH1Q9UPQ0 1083 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 CYP46A1Q9Y6A2 500 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 NRXN2Q9P2S2 1712 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
VPS25-202ENST00000589219 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
VPS25-202ENST00000589219 PTH1RQ03431 593 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 KRT32Q14532 448 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 NFIXQ14938 502 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 CREB3L3Q68CJ9 461 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
VPS25-202ENST00000589219 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
VPS25-202ENST00000589219 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
VPS25-202ENST00000589219 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
VPS25-202ENST00000589219 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
VPS25-202ENST00000589219 WDR33Q9C0J8 1336 aaKnown RBP11.9□□□□□ -0.5
VPS25-202ENST00000589219 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 SLC27A2O14975 620 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 SERPINB2P05120 415 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 CHRNA5P30532 468 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
VPS25-202ENST00000589219 AK2P54819 239 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 CCDC57Q2TAC2 916 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 LRRFIP1Q32MZ4 808 aaKnown RBP11.9□□□□□ -0.5
VPS25-202ENST00000589219 KBTBD3Q8NAB2 608 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
VPS25-202ENST00000589219 SBF1O95248 1867 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 RIC1Q4ADV7 1423 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 KIF3CO14782 793 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 PDIA4P13667 645 aaKnown RBP11.89□□□□□ -0.51
VPS25-202ENST00000589219 HSPA6P17066 643 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 MRE11P49959 708 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 NOL8Q76FK4 1167 aaKnown RBP11.89□□□□□ -0.51
VPS25-202ENST00000589219 RUFY3Q7L099 469 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
VPS25-202ENST00000589219 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
VPS25-202ENST00000589219 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
VPS25-202ENST00000589219 MBD3O95983 291 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 CSF1RP07333 972 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 PKP1Q13835 747 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 NLRP10Q86W26 655 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
VPS25-202ENST00000589219 HELLSQ9NRZ9 838 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 PAG1Q9NWQ8 432 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
VPS25-202ENST00000589219 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
VPS25-202ENST00000589219 DDX49Q9Y6V7 483 aaKnown RBP11.88□□□□□ -0.51
VPS25-202ENST00000589219 SCN7AQ01118 1682 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 H0YIN7 160 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 TAF5LO75529 589 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 TOMM70O94826 608 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 MCMDC2Q4G0Z9 681 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 BICDL1Q6ZP65 573 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
VPS25-202ENST00000589219 TTLL6Q8N841 843 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 LMBRD1Q9NUN5 540 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 LAMB2P55268 1798 aa11.87□□□□□ -0.51
VPS25-202ENST00000589219 ABCB7O75027 752 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 IFIT1P09914 478 aaKnown RBP11.86□□□□□ -0.51
VPS25-202ENST00000589219 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 PDE6BP35913 854 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 CTSWP56202 376 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
VPS25-202ENST00000589219 LRRC24Q50LG9 513 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 C2CD5Q86YS7 1000 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 NEUROD6Q96NK8 337 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
VPS25-202ENST00000589219 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
VPS25-202ENST00000589219 NPHP1O15259 732 aa11.85□□□□□ -0.51
VPS25-202ENST00000589219 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
VPS25-202ENST00000589219 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
VPS25-202ENST00000589219 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
VPS25-202ENST00000589219 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
VPS25-202ENST00000589219 ZMYM1Q5SVZ6 1142 aa11.85□□□□□ -0.51
VPS25-202ENST00000589219 TBC1D9BQ66K14 1250 aa11.85□□□□□ -0.51
VPS25-202ENST00000589219 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
VPS25-202ENST00000589219 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
VPS25-202ENST00000589219 EDC3Q96F86 508 aaKnown RBP11.85□□□□□ -0.51
VPS25-202ENST00000589219 SETDB2Q96T68 719 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms