RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 TRMT112Q9UI30 125 aaKnown RBP16.43■□□□□ 0.22
CNTD1-204ENST00000588408 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
CNTD1-204ENST00000588408 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
CNTD1-204ENST00000588408 CTSWP56202 376 aa16.43■□□□□ 0.22
CNTD1-204ENST00000588408 WASHC4Q2M389 1173 aa16.43■□□□□ 0.22
CNTD1-204ENST00000588408 GIMAP6Q6P9H5 292 aa16.43■□□□□ 0.22
CNTD1-204ENST00000588408 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
CNTD1-204ENST00000588408 MYH7P12883 1935 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 FGD1P98174 961 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
CNTD1-204ENST00000588408 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
CNTD1-204ENST00000588408 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
CNTD1-204ENST00000588408 AKAP2Q9Y2D5 859 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 CDHR2Q9BYE9 1310 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 MCAMP43121 646 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
CNTD1-204ENST00000588408 EXOSC10Q01780 885 aaKnown RBP16.42■□□□□ 0.22
CNTD1-204ENST00000588408 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
CNTD1-204ENST00000588408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.42■□□□□ 0.22
CNTD1-204ENST00000588408 SNAP23O00161 211 aa16.41■□□□□ 0.22
CNTD1-204ENST00000588408 HELBQ8NG08 1087 aaPredicted RBP16.41■□□□□ 0.22
CNTD1-204ENST00000588408 CNNM1Q9NRU3 951 aa16.41■□□□□ 0.22
CNTD1-204ENST00000588408 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
CNTD1-204ENST00000588408 PDCP20941 246 aa16.4■□□□□ 0.22
CNTD1-204ENST00000588408 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
CNTD1-204ENST00000588408 NAP1L2Q9ULW6 460 aaPredicted RBP16.4■□□□□ 0.22
CNTD1-204ENST00000588408 ANKRD18BA2A2Z9 1011 aa16.4■□□□□ 0.22
CNTD1-204ENST00000588408 LIG1P18858 919 aa16.4■□□□□ 0.22
CNTD1-204ENST00000588408 KRT85P78386 507 aa16.4■□□□□ 0.22
CNTD1-204ENST00000588408 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.4■□□□□ 0.22
CNTD1-204ENST00000588408 PFKFB2O60825 505 aa16.39■□□□□ 0.21
CNTD1-204ENST00000588408 PHF14O94880 888 aa16.39■□□□□ 0.21
CNTD1-204ENST00000588408 NSUN7Q8NE18 718 aaKnown RBP16.39■□□□□ 0.21
CNTD1-204ENST00000588408 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
CNTD1-204ENST00000588408 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
CNTD1-204ENST00000588408 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.21
CNTD1-204ENST00000588408 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
CNTD1-204ENST00000588408 FGAP02671 866 aa16.38■□□□□ 0.21
CNTD1-204ENST00000588408 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
CNTD1-204ENST00000588408 MPNDQ8N594 471 aa16.38■□□□□ 0.21
CNTD1-204ENST00000588408 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
CNTD1-204ENST00000588408 RESTQ13127 1097 aa16.38■□□□□ 0.21
CNTD1-204ENST00000588408 ZSCAN30Q86W11 494 aa16.38■□□□□ 0.21
CNTD1-204ENST00000588408 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
CNTD1-204ENST00000588408 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
CNTD1-204ENST00000588408 PHKA1P46020 1223 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 SUSD4Q5VX71 490 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 FUCA2Q9BTY2 467 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 AGXT2Q9BYV1 514 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 PIH1D3Q9NQM4 214 aaKnown RBP16.37■□□□□ 0.21
CNTD1-204ENST00000588408 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
CNTD1-204ENST00000588408 PDE8AO60658 829 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
CNTD1-204ENST00000588408 CAMK4Q16566 473 aa16.37■□□□□ 0.21
CNTD1-204ENST00000588408 MARCH10Q8NA82 808 aaPredicted RBP16.37■□□□□ 0.21
CNTD1-204ENST00000588408 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 GPAA1O43292 621 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 PDIA3P30101 505 aaKnown RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 ITPK1Q13572 414 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 LEO1Q8WVC0 666 aaPredicted RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 SEC31BQ9NQW1 1179 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 PDE8BO95263 885 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 EIF5P55010 431 aaKnown RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 GUCY1B3Q02153 619 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 CEBPZQ03701 1054 aaKnown RBP16.36■□□□□ 0.21
CNTD1-204ENST00000588408 DDB1Q16531 1140 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 APPBP2Q92624 585 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 PGBD1Q96JS3 809 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 USP25Q9UHP3 1055 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
CNTD1-204ENST00000588408 H3BQV1 296 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
CNTD1-204ENST00000588408 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 FAM184AQ8NB25 1140 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
CNTD1-204ENST00000588408 COL4A1P02462 1669 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
CNTD1-204ENST00000588408 NBPF3Q9H094 633 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 ELP1O95163 1332 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 KCNQ2O43526 872 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 ZFYP08048 801 aaPredicted RBP16.34■□□□□ 0.21
CNTD1-204ENST00000588408 ANTXR2P58335 489 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 CCDC87Q9NVE4 849 aa16.34■□□□□ 0.21
CNTD1-204ENST00000588408 ADD2P35612 726 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms