RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 USP44Q9H0E7 712 aa25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 BICC1Q9H694 974 aaKnown RBP25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 UTYO14607 1347 aa25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 POLR2AP24928 1970 aaKnown RBP25.27■■□□□ 1.64
TRAPPC6A-203ENST00000587818 USP48Q86UV5 1035 aa25.27■■□□□ 1.64
TRAPPC6A-203ENST00000587818 PUS3Q9BZE2 481 aaKnown RBP25.27■■□□□ 1.64
TRAPPC6A-203ENST00000587818 CNNM1Q9NRU3 951 aa25.27■■□□□ 1.64
TRAPPC6A-203ENST00000587818 ZC3H15Q8WU90 426 aaKnown RBP25.26■■□□□ 1.63
TRAPPC6A-203ENST00000587818 COA1Q9GZY4 146 aa25.26■■□□□ 1.63
TRAPPC6A-203ENST00000587818 ABT1Q9ULW3 272 aaKnown RBP25.26■■□□□ 1.63
TRAPPC6A-203ENST00000587818 CT47B1P0C2W7 299 aaPredicted RBP25.25■■□□□ 1.63
TRAPPC6A-203ENST00000587818 VEGFBP49765 207 aa25.25■■□□□ 1.63
TRAPPC6A-203ENST00000587818 RARSP54136 660 aaKnown RBP25.25■■□□□ 1.63
TRAPPC6A-203ENST00000587818 HNRNPUQ00839 825 aaKnown RBP eCLIP25.25■■□□□ 1.63
TRAPPC6A-203ENST00000587818 ANKRD44Q8N8A2 993 aa25.25■■□□□ 1.63
TRAPPC6A-203ENST00000587818 GMLQ99445 158 aa25.25■■□□□ 1.63
TRAPPC6A-203ENST00000587818 CNTNAP1P78357 1384 aa25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 ASTN2O75129 1339 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 KIF4BQ2VIQ3 1234 aa25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 DEFB115Q30KQ5 88 aa25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 CDC37L1Q7L3B6 337 aa25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 AGBL3Q8NEM8 1001 aa25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 ZNF408Q9H9D4 720 aa25.24■■□□□ 1.63
TRAPPC6A-203ENST00000587818 DACT2Q5SW24 774 aa25.23■■□□□ 1.63
TRAPPC6A-203ENST00000587818 CELF2O95319 508 aaKnown RBP25.22■■□□□ 1.63
TRAPPC6A-203ENST00000587818 USP17L8P0C7I0 530 aa25.22■■□□□ 1.63
TRAPPC6A-203ENST00000587818 TRPM7Q96QT4 1865 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 PSME4Q14997 1843 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 IRS2Q9Y4H2 1338 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 ZNF280AP59817 542 aaPredicted RBP25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 GTF2IP78347 998 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 RABL6Q3YEC7 729 aaPredicted RBP25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 TTLL5Q6EMB2 1281 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 KLHDC4Q8TBB5 520 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 CD209Q9NNX6 404 aa25.21■■□□□ 1.63
TRAPPC6A-203ENST00000587818 SCARF1Q14162 830 aa25.2■■□□□ 1.62
TRAPPC6A-203ENST00000587818 DCPSQ96C86 337 aaKnown RBP25.2■■□□□ 1.62
TRAPPC6A-203ENST00000587818 RASSF10A6NK89 507 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 ADM5C9JUS6 153 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 HSPA1AP0DMV8 641 aaKnown RBP25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 HSPA1BP0DMV9 641 aaKnown RBP25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 LRRC24Q50LG9 513 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 STRIP1Q5VSL9 837 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 KRT26Q7Z3Y9 468 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 API5Q9BZZ5 524 aaKnown RBP25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 MYOZ2Q9NPC6 264 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 RIPOR2Q9Y4F9 1068 aa25.19■■□□□ 1.62
TRAPPC6A-203ENST00000587818 BRPF1P55201 1214 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC6A-203ENST00000587818 GRM1Q13255 1194 aa25.18■■□□□ 1.62
TRAPPC6A-203ENST00000587818 PAXIP1Q6ZW49 1069 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC6A-203ENST00000587818 SCAF8Q9UPN6 1271 aaKnown RBP25.18■■□□□ 1.62
TRAPPC6A-203ENST00000587818 A0A1B0GUL6 1792 aa25.18■■□□□ 1.62
TRAPPC6A-203ENST00000587818 BCAR3O75815 825 aa25.17■■□□□ 1.62
TRAPPC6A-203ENST00000587818 C15orf52Q6ZUT6 534 aaKnown RBP25.17■■□□□ 1.62
TRAPPC6A-203ENST00000587818 GGA3Q9NZ52 723 aa25.17■■□□□ 1.62
TRAPPC6A-203ENST00000587818 JAG2Q9Y219 1238 aa25.17■■□□□ 1.62
TRAPPC6A-203ENST00000587818 ANGEL2Q5VTE6 544 aaKnown RBP25.16■■□□□ 1.62
TRAPPC6A-203ENST00000587818 TNNQ9UQP3 1299 aa25.16■■□□□ 1.62
TRAPPC6A-203ENST00000587818 WDR33Q9C0J8 1336 aaKnown RBP25.15■■□□□ 1.62
TRAPPC6A-203ENST00000587818 CYP4F22Q6NT55 531 aa25.15■■□□□ 1.62
TRAPPC6A-203ENST00000587818 KIAA0825Q8IV33 1275 aa25.15■■□□□ 1.62
TRAPPC6A-203ENST00000587818 TLL2Q9Y6L7 1015 aa25.15■■□□□ 1.62
TRAPPC6A-203ENST00000587818 GYG1P46976 350 aa25.14■■□□□ 1.62
TRAPPC6A-203ENST00000587818 NBPF9Q3BBW0 867 aa25.14■■□□□ 1.62
TRAPPC6A-203ENST00000587818 ZNF804AQ7Z570 1209 aa25.14■■□□□ 1.62
TRAPPC6A-203ENST00000587818 ZNF646O15015 1829 aaPredicted RBP25.14■■□□□ 1.61
TRAPPC6A-203ENST00000587818 ZNF609O15014 1411 aa25.13■■□□□ 1.61
TRAPPC6A-203ENST00000587818 UBTFL1P0CB47 393 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC6A-203ENST00000587818 UBE4AQ14139 1066 aa25.13■■□□□ 1.61
TRAPPC6A-203ENST00000587818 METTL24Q5JXM2 366 aa25.13■■□□□ 1.61
TRAPPC6A-203ENST00000587818 OGFOD1Q8N543 542 aa25.13■■□□□ 1.61
TRAPPC6A-203ENST00000587818 FRAT1Q92837 279 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC6A-203ENST00000587818 IL1R1P14778 569 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 RFX5P48382 616 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 SAPCD2Q86UD0 394 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 SULF1Q8IWU6 871 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 CERS5Q8N5B7 392 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 FAM84BQ96KN1 310 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 CAPNS2Q96L46 248 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 MROH5Q6ZUA9 1318 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 MYO3BQ8WXR4 1341 aa25.12■■□□□ 1.61
TRAPPC6A-203ENST00000587818 ARHGAP45Q92619 1136 aa25.11■■□□□ 1.61
TRAPPC6A-203ENST00000587818 MEIS3Q99687 375 aa25.11■■□□□ 1.61
TRAPPC6A-203ENST00000587818 PCNTO95613 3336 aa25.11■■□□□ 1.61
TRAPPC6A-203ENST00000587818 F8W031 263 aaPredicted RBP25.1■■□□□ 1.61
TRAPPC6A-203ENST00000587818 SASH1O94885 1247 aa25.1■■□□□ 1.61
TRAPPC6A-203ENST00000587818 HIBADHP31937 336 aaKnown RBP25.1■■□□□ 1.61
TRAPPC6A-203ENST00000587818 LRRFIP2Q9Y608 721 aaKnown RBP25.1■■□□□ 1.61
TRAPPC6A-203ENST00000587818 KIF16BQ96L93 1317 aa25.1■■□□□ 1.61
TRAPPC6A-203ENST00000587818 WNT10BO00744 389 aa25.09■■□□□ 1.61
TRAPPC6A-203ENST00000587818 AOC2O75106 756 aa25.09■■□□□ 1.61
TRAPPC6A-203ENST00000587818 COL13A1Q5TAT6 717 aaPredicted RBP25.09■■□□□ 1.61
TRAPPC6A-203ENST00000587818 PRAMEF18Q5VWM3 479 aa25.09■■□□□ 1.61
TRAPPC6A-203ENST00000587818 CLUAP1Q96AJ1 413 aa25.09■■□□□ 1.61
TRAPPC6A-203ENST00000587818 CDCA5Q96FF9 252 aa25.09■■□□□ 1.61
TRAPPC6A-203ENST00000587818 IPO8O15397 1037 aaKnown RBP25.08■■□□□ 1.61
TRAPPC6A-203ENST00000587818 PTPN12Q05209 780 aaKnown RBP25.08■■□□□ 1.61
TRAPPC6A-203ENST00000587818 INTS3Q68E01 1043 aaKnown RBP25.08■■□□□ 1.61
TRAPPC6A-203ENST00000587818 HDAC9Q9UKV0 1011 aa25.08■■□□□ 1.61
TRAPPC6A-203ENST00000587818 IQSEC3Q9UPP2 1182 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms