RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
RDH13-209ENST00000587721 FAM155AB1AL88 458 aaPredicted RBP17.55■□□□□ 0.4
RDH13-209ENST00000587721 FLIIQ13045 1269 aa17.55■□□□□ 0.4
RDH13-209ENST00000587721 FKBP5Q13451 457 aaPredicted RBP17.55■□□□□ 0.4
RDH13-209ENST00000587721 GCKRQ14397 625 aa17.55■□□□□ 0.4
RDH13-209ENST00000587721 STRIP1Q5VSL9 837 aa17.55■□□□□ 0.4
RDH13-209ENST00000587721 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
RDH13-209ENST00000587721 ZIC5Q96T25 663 aa17.55■□□□□ 0.4
RDH13-209ENST00000587721 GMLQ99445 158 aa17.55■□□□□ 0.4
RDH13-209ENST00000587721 ASTN2O75129 1339 aaPredicted RBP17.54■□□□□ 0.4
RDH13-209ENST00000587721 ITGA6P23229 1130 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 DGKZQ13574 1117 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 G2E3Q7L622 706 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 LINS1Q8NG48 757 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 MCOLN1Q9GZU1 580 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 MRS2Q9HD23 443 aa17.54■□□□□ 0.4
RDH13-209ENST00000587721 SLC10A3P09131 477 aa17.53■□□□□ 0.4
RDH13-209ENST00000587721 NF2P35240 595 aa17.53■□□□□ 0.4
RDH13-209ENST00000587721 KCNJ4P48050 445 aa17.53■□□□□ 0.4
RDH13-209ENST00000587721 CCDC184Q52MB2 194 aa17.53■□□□□ 0.4
RDH13-209ENST00000587721 ZNF804BA4D1E1 1349 aa17.52■□□□□ 0.4
RDH13-209ENST00000587721 SCN9AQ15858 1988 aa17.52■□□□□ 0.4
RDH13-209ENST00000587721 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
RDH13-209ENST00000587721 WDR63Q8IWG1 891 aa17.52■□□□□ 0.4
RDH13-209ENST00000587721 HDAC9Q9UKV0 1011 aa17.52■□□□□ 0.4
RDH13-209ENST00000587721 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
RDH13-209ENST00000587721 ANP32CO43423 234 aa17.51■□□□□ 0.39
RDH13-209ENST00000587721 TRPA1O75762 1119 aa17.51■□□□□ 0.39
RDH13-209ENST00000587721 MLLT1Q03111 559 aaPredicted RBP17.51■□□□□ 0.39
RDH13-209ENST00000587721 TTLL5Q6EMB2 1281 aa17.51■□□□□ 0.39
RDH13-209ENST00000587721 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
RDH13-209ENST00000587721 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
RDH13-209ENST00000587721 CSF1RP07333 972 aa17.5■□□□□ 0.39
RDH13-209ENST00000587721 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
RDH13-209ENST00000587721 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
RDH13-209ENST00000587721 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
RDH13-209ENST00000587721 WTIPA6NIX2 430 aaPredicted RBP17.49■□□□□ 0.39
RDH13-209ENST00000587721 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
RDH13-209ENST00000587721 POLR2AP24928 1970 aaKnown RBP17.49■□□□□ 0.39
RDH13-209ENST00000587721 WNT10BO00744 389 aa17.48■□□□□ 0.39
RDH13-209ENST00000587721 VAMP4O75379 141 aa17.48■□□□□ 0.39
RDH13-209ENST00000587721 RGS19P49795 217 aa17.48■□□□□ 0.39
RDH13-209ENST00000587721 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
RDH13-209ENST00000587721 RASAL3Q86YV0 1011 aa17.48■□□□□ 0.39
RDH13-209ENST00000587721 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
RDH13-209ENST00000587721 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
RDH13-209ENST00000587721 CASP7P55210 303 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 GTF2IP78347 998 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
RDH13-209ENST00000587721 CHRNDQ07001 517 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 TXNRD3Q86VQ6 643 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 APOBEC3FQ8IUX4 373 aaKnown RBP17.47■□□□□ 0.39
RDH13-209ENST00000587721 MXD3Q9BW11 206 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 MYH3P11055 1940 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 PSME4Q14997 1843 aa17.47■□□□□ 0.39
RDH13-209ENST00000587721 UBE2Q2LH0YL09 131 aa17.46■□□□□ 0.39
RDH13-209ENST00000587721 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
RDH13-209ENST00000587721 KIAA0825Q8IV33 1275 aa17.46■□□□□ 0.39
RDH13-209ENST00000587721 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
RDH13-209ENST00000587721 SASH1O94885 1247 aa17.45■□□□□ 0.38
RDH13-209ENST00000587721 TAF7LQ5H9L4 462 aa17.45■□□□□ 0.38
RDH13-209ENST00000587721 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
RDH13-209ENST00000587721 CD209Q9NNX6 404 aa17.45■□□□□ 0.38
RDH13-209ENST00000587721 SCAF8Q9UPN6 1271 aaKnown RBP17.45■□□□□ 0.38
RDH13-209ENST00000587721 CASP8AP2Q9UKL3 1982 aa17.45■□□□□ 0.38
RDH13-209ENST00000587721 MYO1BO43795 1136 aa17.44■□□□□ 0.38
RDH13-209ENST00000587721 KLRK1P26718 216 aa17.44■□□□□ 0.38
RDH13-209ENST00000587721 DLGAP5Q15398 846 aa17.44■□□□□ 0.38
RDH13-209ENST00000587721 CCDC57Q2TAC2 916 aa17.44■□□□□ 0.38
RDH13-209ENST00000587721 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
RDH13-209ENST00000587721 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
RDH13-209ENST00000587721 C15orf52Q6ZUT6 534 aaKnown RBP17.43■□□□□ 0.38
RDH13-209ENST00000587721 MOB2Q70IA6 237 aa17.43■□□□□ 0.38
RDH13-209ENST00000587721 CTU1Q7Z7A3 348 aaKnown RBP17.43■□□□□ 0.38
RDH13-209ENST00000587721 C9orf78Q9NZ63 289 aaPredicted RBP17.43■□□□□ 0.38
RDH13-209ENST00000587721 F6X3S4 739 aa17.42■□□□□ 0.38
RDH13-209ENST00000587721 TAF5LO75529 589 aa17.42■□□□□ 0.38
RDH13-209ENST00000587721 FOXO4P98177 505 aa17.42■□□□□ 0.38
RDH13-209ENST00000587721 SREBF2Q12772 1141 aa17.42■□□□□ 0.38
RDH13-209ENST00000587721 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
RDH13-209ENST00000587721 GRM8O00222 908 aa17.41■□□□□ 0.38
RDH13-209ENST00000587721 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
RDH13-209ENST00000587721 LDHAL6AQ6ZMR3 332 aa17.41■□□□□ 0.38
RDH13-209ENST00000587721 HELBQ8NG08 1087 aaPredicted RBP17.41■□□□□ 0.38
RDH13-209ENST00000587721 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
RDH13-209ENST00000587721 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 IL1R1P14778 569 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 TM4SF4P48230 202 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 FKBP1AP62942 108 aaKnown RBP17.4■□□□□ 0.38
RDH13-209ENST00000587721 PKN2Q16513 984 aaKnown RBP17.4■□□□□ 0.38
RDH13-209ENST00000587721 ZBED3Q96IU2 234 aaPredicted RBP17.4■□□□□ 0.38
RDH13-209ENST00000587721 DEFB129Q9H1M3 183 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 PPP2R3BQ9Y5P8 575 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
RDH13-209ENST00000587721 COL1A1P02452 1464 aaPredicted RBP17.39■□□□□ 0.37
RDH13-209ENST00000587721 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms