RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 AACSQ86V21 672 aa20.86■□□□□ 0.93
PRKCSH-203ENST00000586486 YBX3P16989 372 aaKnown RBP eCLIP20.86■□□□□ 0.938e-10■□□□□ 8.8
PRKCSH-203ENST00000586486 EYA3Q99504 573 aa20.86■□□□□ 0.93
PRKCSH-203ENST00000586486 LNPKQ9C0E8 428 aa20.86■□□□□ 0.93
PRKCSH-203ENST00000586486 C6orf229H3BNL8 230 aa20.85■□□□□ 0.93
PRKCSH-203ENST00000586486 NFKBIEO00221 500 aa20.85■□□□□ 0.93
PRKCSH-203ENST00000586486 TIMM10P62072 90 aa20.85■□□□□ 0.93
PRKCSH-203ENST00000586486 TAOK3Q9H2K8 898 aa20.85■□□□□ 0.93
PRKCSH-203ENST00000586486 DBNLQ9UJU6 430 aaKnown RBP20.85■□□□□ 0.93
PRKCSH-203ENST00000586486 XAGE2Q96GT9 111 aa20.84■□□□□ 0.93
PRKCSH-203ENST00000586486 VPS33BQ9H267 617 aa20.84■□□□□ 0.93
PRKCSH-203ENST00000586486 IFIT2P09913 472 aaKnown RBP20.83■□□□□ 0.93
PRKCSH-203ENST00000586486 KLRK1P26718 216 aa20.83■□□□□ 0.93
PRKCSH-203ENST00000586486 NEUROD6Q96NK8 337 aa20.83■□□□□ 0.93
PRKCSH-203ENST00000586486 TLR7Q9NYK1 1049 aaKnown RBP20.83■□□□□ 0.93
PRKCSH-203ENST00000586486 ADORA1P30542 326 aa20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 DBNDD2Q9BQY9 259 aa20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 CCDC8Q9H0W5 538 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 SALL3Q9BXA9 1300 aa20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 KIAA2012Q0VF49 1180 aa20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 TXNRD3Q86VQ6 643 aa20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
PRKCSH-203ENST00000586486 ZBTB22O15209 634 aa20.81■□□□□ 0.92
PRKCSH-203ENST00000586486 CAVIN4Q5BKX8 364 aa20.81■□□□□ 0.92
PRKCSH-203ENST00000586486 GPR101Q96P66 508 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-203ENST00000586486 ZC3H12CQ9C0D7 883 aaKnown RBP20.81■□□□□ 0.92
PRKCSH-203ENST00000586486 GPR162Q16538 588 aa20.8■□□□□ 0.92
PRKCSH-203ENST00000586486 FBXO33Q7Z6M2 555 aa20.8■□□□□ 0.92
PRKCSH-203ENST00000586486 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-203ENST00000586486 FAM84BQ96KN1 310 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-203ENST00000586486 MYH13Q9UKX3 1938 aa20.8■□□□□ 0.92
PRKCSH-203ENST00000586486 SBF1O95248 1867 aa20.8■□□□□ 0.92
PRKCSH-203ENST00000586486 DICER1Q9UPY3 1922 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-203ENST00000586486 CCDC102BQ68D86 513 aa20.79■□□□□ 0.92
PRKCSH-203ENST00000586486 ZNF804AQ7Z570 1209 aa20.79■□□□□ 0.92
PRKCSH-203ENST00000586486 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
PRKCSH-203ENST00000586486 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 GRIN3BO60391 1043 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 MX1P20591 662 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 PDE4AP27815 886 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 GYG1P46976 350 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 GORABQ5T7V8 394 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 ARHGAP27Q6ZUM4 889 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 OTUD7AQ8TE49 926 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 ZNF512BQ96KM6 892 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 BCL11AQ9H165 835 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 ZNF277Q9NRM2 450 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 STAP2Q9UGK3 403 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 COL4A5P29400 1685 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 TTC41PQ6P2S7 1318 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 HIBADHP31937 336 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 IARSP41252 1262 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 RASSF7Q02833 373 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 AOC3Q16853 763 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 CCDC158Q5M9N0 1113 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 COA1Q9GZY4 146 aa20.78■□□□□ 0.92
PRKCSH-203ENST00000586486 RIMBP2O15034 1052 aa20.77■□□□□ 0.92
PRKCSH-203ENST00000586486 ARID4AP29374 1257 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-203ENST00000586486 PHKA1P46020 1223 aa20.77■□□□□ 0.92
PRKCSH-203ENST00000586486 BCAMP50895 628 aa20.77■□□□□ 0.92
PRKCSH-203ENST00000586486 VPS37DQ86XT2 251 aa20.77■□□□□ 0.92
PRKCSH-203ENST00000586486 ECHDC1Q9NTX5 307 aa20.77■□□□□ 0.92
PRKCSH-203ENST00000586486 AOX1Q06278 1338 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 UQCRFS1P1P0C7P4 283 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 IL1R1P14778 569 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 PLEKHM2Q8IWE5 1019 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 OSBPL3Q9H4L5 887 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 PSME4Q14997 1843 aa20.76■□□□□ 0.91
PRKCSH-203ENST00000586486 SEMA3EO15041 775 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 PDE1AP54750 535 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 CD209Q9NNX6 404 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 GNL3LQ9NVN8 582 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 CHD4Q14839 1912 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 ATP5JP18859 108 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 LMNB1P20700 586 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 PRELPP51888 382 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 TTC39AQ5SRH9 613 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 TDRD7Q8NHU6 1098 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-203ENST00000586486 ZNF646O15015 1829 aaPredicted RBP20.74■□□□□ 0.91
PRKCSH-203ENST00000586486 UTRNP46939 3433 aa20.74■□□□□ 0.91
PRKCSH-203ENST00000586486 PDS5AQ29RF7 1337 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-203ENST00000586486 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
PRKCSH-203ENST00000586486 PODNQ7Z5L7 613 aa20.74■□□□□ 0.91
PRKCSH-203ENST00000586486 COL1A1P02452 1464 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-203ENST00000586486 SCN9AQ15858 1988 aa20.73■□□□□ 0.91
PRKCSH-203ENST00000586486 ERC2O15083 957 aa20.73■□□□□ 0.91
PRKCSH-203ENST00000586486 ECE2O60344 883 aa20.73■□□□□ 0.91
PRKCSH-203ENST00000586486 PI4K2BQ8TCG2 481 aa20.73■□□□□ 0.91
PRKCSH-203ENST00000586486 GLRX3O76003 335 aaKnown RBP20.72■□□□□ 0.91
PRKCSH-203ENST00000586486 RASGRF1Q13972 1273 aa20.72■□□□□ 0.91
PRKCSH-203ENST00000586486 DOK7Q18PE1 504 aa20.72■□□□□ 0.91
PRKCSH-203ENST00000586486 NIM1KQ8IY84 436 aa20.72■□□□□ 0.91
PRKCSH-203ENST00000586486 DBNDD1Q9H9R9 158 aa20.72■□□□□ 0.91
PRKCSH-203ENST00000586486 G3V3G9 751 aa20.71■□□□□ 0.91
PRKCSH-203ENST00000586486 MCAMP43121 646 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms