RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 NBPF4Q96M43 638 aa15.05■□□□□ 0
RAB11FIP4-210ENST00000585058 RTL1A6NKG5 1358 aa15.05■□□□□ 0
RAB11FIP4-210ENST00000585058 MCMDC2Q4G0Z9 681 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 DPH6Q7L8W6 267 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 LRRC45Q96CN5 670 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 F13A1P00488 732 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 PLCB3Q01970 1234 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 CCDC50Q8IVM0 306 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 GOLGA1Q92805 767 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 SBNO2Q9Y2G9 1366 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 CALM1P0DP23 149 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 CALM2P0DP24 149 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 CALM3P0DP25 149 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 PDE1AP54750 535 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 KIF5AQ12840 1032 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 PICALMQ13492 652 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 CTTNBP2Q8WZ74 1663 aa15.05■□□□□ -0
RAB11FIP4-210ENST00000585058 ATP2B3Q16720 1220 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 KARSQ15046 597 aaKnown RBP15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 ANKS4BQ8N8V4 417 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 STMN4Q9H169 189 aaPredicted RBP15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 SLU7O95391 586 aaKnown RBP15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 CAPN2P17655 700 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 KRT83P78385 493 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 KRT28Q7Z3Y7 464 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 SMC6Q96SB8 1091 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 ATP2A1O14983 1001 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 ANKRD24Q8TF21 1146 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 TCHPQ9BT92 498 aa15.04■□□□□ -0
RAB11FIP4-210ENST00000585058 NDC80O14777 642 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 KRT86O43790 486 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 PSMC4P43686 418 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 STX17P56962 302 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 SMARCC2Q8TAQ2 1214 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 CCDC42Q96M95 316 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 IMPG2Q9BZV3 1241 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 GUCA1BQ9UMX6 200 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 ST5P78524 1137 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 SLC9C2Q5TAH2 1124 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 LMBR1Q8WVP7 490 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 SPTLC2O15270 562 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 GTF2A1P52655 376 aaPredicted RBP15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 HDAC1Q13547 482 aaPredicted RBP15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 MICALL1Q8N3F8 863 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 LZTFL1Q9NQ48 299 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 UBXN1Q04323 297 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 DNAJC21Q5F1R6 531 aaKnown RBP15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 CCDC121Q6ZUS5 278 aa15.03■□□□□ -0
RAB11FIP4-210ENST00000585058 TRIM75PA6NK02 468 aa15.02■□□□□ -0
RAB11FIP4-210ENST00000585058 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
RAB11FIP4-210ENST00000585058 GNAQP50148 359 aa15.02■□□□□ -0
RAB11FIP4-210ENST00000585058 NAA16Q6N069 864 aaPredicted RBP15.02■□□□□ -0
RAB11FIP4-210ENST00000585058 XRCC6P12956 609 aaKnown RBP eCLIP15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 TYRO3Q06418 890 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 IFT81Q8WYA0 676 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 FAM212AQ96EL1 285 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CHRNA2Q15822 529 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CHST3Q7LGC8 479 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 TTC14Q96N46 770 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 VPS18Q9P253 973 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 NMIQ13287 307 aaPredicted RBP15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 AKNAD1Q5T1N1 836 aa15.02□□□□□ -0.01
RAB11FIP4-210ENST00000585058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 ZEB2O60315 1214 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 DAAM2Q86T65 1068 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 RHOXF2BP0C7M4 288 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 FBLN1P23142 703 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CEP57Q86XR8 500 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 RHOXF2Q9BQY4 288 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 C6orf50Q9HD87 102 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 ZNF569Q5MCW4 686 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 NEK11Q8NG66 645 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 IL16Q14005 1332 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CCDC25Q86WR0 208 aa15.01□□□□□ -0.01
RAB11FIP4-210ENST00000585058 TLDC2A0PJX2 215 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 FAM13AO94988 1023 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 LMBR1LQ6UX01 489 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 COPS6Q7L5N1 327 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CFAP57Q96MR6 1250 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 PPP1R9BQ96SB3 815 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 ZKSCAN5Q9Y2L8 839 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 KRT79Q5XKE5 535 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 ZGPATQ8N5A5 531 aaKnown RBP15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 NSD2O96028 1365 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 PCDHB15Q9Y5E8 787 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 MCM7P33993 719 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CLCN1P35523 988 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 TNNI2P48788 182 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 TRAF1Q13077 416 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 MAP7D1Q3KQU3 841 aa15□□□□□ -0.01
RAB11FIP4-210ENST00000585058 CPLX4Q7Z7G2 160 aa14.99□□□□□ -0.01
RAB11FIP4-210ENST00000585058 ATP6V0A2Q9Y487 856 aa14.99□□□□□ -0.01
RAB11FIP4-210ENST00000585058 PLS1Q14651 629 aa14.99□□□□□ -0.01
RAB11FIP4-210ENST00000585058 KCNK9Q9NPC2 374 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms