RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 EPHX2P34913 555 aa17.15■□□□□ 0.34
TRAF4-215ENST00000584944 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
TRAF4-215ENST00000584944 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
TRAF4-215ENST00000584944 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
TRAF4-215ENST00000584944 VPS33BQ9H267 617 aa17.15■□□□□ 0.34
TRAF4-215ENST00000584944 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
TRAF4-215ENST00000584944 MKRN1Q9UHC7 482 aaKnown RBP17.15■□□□□ 0.34
TRAF4-215ENST00000584944 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
TRAF4-215ENST00000584944 TAF1P21675 1872 aa17.15■□□□□ 0.34
TRAF4-215ENST00000584944 ZNF804BA4D1E1 1349 aa17.15■□□□□ 0.34
TRAF4-215ENST00000584944 TAF5LO75529 589 aa17.14■□□□□ 0.33
TRAF4-215ENST00000584944 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
TRAF4-215ENST00000584944 EAPPQ56P03 285 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-215ENST00000584944 VPS37DQ86XT2 251 aa17.14■□□□□ 0.33
TRAF4-215ENST00000584944 GPC2Q8N158 579 aa17.14■□□□□ 0.33
TRAF4-215ENST00000584944 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
TRAF4-215ENST00000584944 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-215ENST00000584944 COL4A5P29400 1685 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 ADAMTSL1Q8N6G6 1762 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 SPEF2Q9C093 1822 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-215ENST00000584944 AOC3Q16853 763 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 PNMA8AQ86V59 439 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-215ENST00000584944 ERC1Q8IUD2 1116 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 TNS4Q8IZW8 715 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-215ENST00000584944 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 AKAP2Q9Y2D5 859 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
TRAF4-215ENST00000584944 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
TRAF4-215ENST00000584944 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
TRAF4-215ENST00000584944 POLA2Q14181 598 aa17.12■□□□□ 0.33
TRAF4-215ENST00000584944 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
TRAF4-215ENST00000584944 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
TRAF4-215ENST00000584944 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
TRAF4-215ENST00000584944 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
TRAF4-215ENST00000584944 TMEM88BA6NKF7 163 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 APBB1O00213 710 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 PDE8BO95263 885 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 SLC5A1P13866 664 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 ZNF804AQ7Z570 1209 aa17.11■□□□□ 0.33
TRAF4-215ENST00000584944 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-215ENST00000584944 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
TRAF4-215ENST00000584944 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
TRAF4-215ENST00000584944 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
TRAF4-215ENST00000584944 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-215ENST00000584944 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
TRAF4-215ENST00000584944 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-215ENST00000584944 ATG9AQ7Z3C6 839 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-215ENST00000584944 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 GJA3Q9Y6H8 435 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 COL4A1P02462 1669 aa17.09■□□□□ 0.33
TRAF4-215ENST00000584944 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
TRAF4-215ENST00000584944 TFCP2Q12800 502 aa17.08■□□□□ 0.32
TRAF4-215ENST00000584944 LPIN2Q92539 896 aa17.08■□□□□ 0.32
TRAF4-215ENST00000584944 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
TRAF4-215ENST00000584944 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
TRAF4-215ENST00000584944 ECE2O60344 883 aa17.07■□□□□ 0.32
TRAF4-215ENST00000584944 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
TRAF4-215ENST00000584944 VEGFBP49765 207 aa17.07■□□□□ 0.32
TRAF4-215ENST00000584944 SCNN1DP51172 638 aa17.07■□□□□ 0.32
TRAF4-215ENST00000584944 TNIP1Q15025 636 aa17.07■□□□□ 0.32
TRAF4-215ENST00000584944 GNL3LQ9NVN8 582 aaKnown RBP17.07■□□□□ 0.32
TRAF4-215ENST00000584944 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
TRAF4-215ENST00000584944 EPS15P42566 896 aa17.06■□□□□ 0.32
TRAF4-215ENST00000584944 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
TRAF4-215ENST00000584944 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
TRAF4-215ENST00000584944 SNAP23O00161 211 aa17.05■□□□□ 0.32
TRAF4-215ENST00000584944 FOXN1O15353 648 aa17.05■□□□□ 0.32
TRAF4-215ENST00000584944 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
TRAF4-215ENST00000584944 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
TRAF4-215ENST00000584944 CLASRPQ8N2M8 674 aaKnown RBP17.05■□□□□ 0.32
TRAF4-215ENST00000584944 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
TRAF4-215ENST00000584944 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
TRAF4-215ENST00000584944 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
TRAF4-215ENST00000584944 CAPN15O75808 1086 aa17.04■□□□□ 0.32
TRAF4-215ENST00000584944 RAD17O75943 681 aa17.04■□□□□ 0.32
TRAF4-215ENST00000584944 SIRT2Q8IXJ6 389 aa17.04■□□□□ 0.32
TRAF4-215ENST00000584944 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
TRAF4-215ENST00000584944 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
TRAF4-215ENST00000584944 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
TRAF4-215ENST00000584944 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-215ENST00000584944 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
TRAF4-215ENST00000584944 GYG1P46976 350 aa17.03■□□□□ 0.32
TRAF4-215ENST00000584944 DEFB115Q30KQ5 88 aa17.03■□□□□ 0.32
TRAF4-215ENST00000584944 CIAPIN1Q6FI81 312 aa17.03■□□□□ 0.32
TRAF4-215ENST00000584944 C15orf52Q6ZUT6 534 aaKnown RBP17.03■□□□□ 0.32
TRAF4-215ENST00000584944 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-215ENST00000584944 DUOX1Q9NRD9 1551 aa17.02■□□□□ 0.32
TRAF4-215ENST00000584944 KLRK1P26718 216 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms