RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 ARAP2Q8WZ64 1704 aa9.96□□□□□ -0.81
CTC1-213ENST00000584842 ZNF646O15015 1829 aaPredicted RBP9.96□□□□□ -0.81
CTC1-213ENST00000584842 TAF5LO75529 589 aa9.96□□□□□ -0.82
CTC1-213ENST00000584842 EPS15P42566 896 aa9.96□□□□□ -0.82
CTC1-213ENST00000584842 RSBN1LQ6PCB5 846 aaPredicted RBP9.96□□□□□ -0.82
CTC1-213ENST00000584842 ITPRIPQ8IWB1 547 aa9.96□□□□□ -0.82
CTC1-213ENST00000584842 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
CTC1-213ENST00000584842 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.82
CTC1-213ENST00000584842 AGBL3Q8NEM8 1001 aa9.96□□□□□ -0.82
CTC1-213ENST00000584842 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
CTC1-213ENST00000584842 MEIS3Q99687 375 aa9.96□□□□□ -0.82
CTC1-213ENST00000584842 CNOT7Q9UIV1 285 aaKnown RBP9.96□□□□□ -0.82
CTC1-213ENST00000584842 GNAI2P04899 355 aa9.95□□□□□ -0.82
CTC1-213ENST00000584842 VIL1P09327 827 aaKnown RBP9.95□□□□□ -0.82
CTC1-213ENST00000584842 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
CTC1-213ENST00000584842 POTEJP0CG39 1038 aa9.95□□□□□ -0.82
CTC1-213ENST00000584842 UBE4AQ14139 1066 aa9.95□□□□□ -0.82
CTC1-213ENST00000584842 C15orf52Q6ZUT6 534 aaKnown RBP9.95□□□□□ -0.82
CTC1-213ENST00000584842 VPS37DQ86XT2 251 aa9.95□□□□□ -0.82
CTC1-213ENST00000584842 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
CTC1-213ENST00000584842 ZBTB12Q9Y330 459 aaPredicted RBP9.95□□□□□ -0.82
CTC1-213ENST00000584842 ECM29Q5VYK3 1845 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 EYA2O00167 538 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 CIAO1O76071 339 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 IFIT1P09914 478 aaKnown RBP9.94□□□□□ -0.82
CTC1-213ENST00000584842 KLRK1P26718 216 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 MMP14P50281 582 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 PUM3Q15397 648 aaKnown RBP9.94□□□□□ -0.82
CTC1-213ENST00000584842 CAVIN4Q5BKX8 364 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 STRIP1Q5VSL9 837 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 OGFOD1Q8N543 542 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 TMEM57Q8N5G2 664 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.94□□□□□ -0.82
CTC1-213ENST00000584842 ZC3H15Q8WU90 426 aaKnown RBP9.94□□□□□ -0.82
CTC1-213ENST00000584842 PUS3Q9BZE2 481 aaKnown RBP9.94□□□□□ -0.82
CTC1-213ENST00000584842 RCAN3Q9UKA8 241 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 RIPOR2Q9Y4F9 1068 aa9.94□□□□□ -0.82
CTC1-213ENST00000584842 POLR2AP24928 1970 aaKnown RBP9.94□□□□□ -0.82
CTC1-213ENST00000584842 WTIPA6NIX2 430 aaPredicted RBP9.93□□□□□ -0.82
CTC1-213ENST00000584842 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 FRAT2O75474 233 aaPredicted RBP9.93□□□□□ -0.82
CTC1-213ENST00000584842 PDE8BO95263 885 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 SLC5A1P13866 664 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 KIF4BQ2VIQ3 1234 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 LRRC24Q50LG9 513 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 MAP1SQ66K74 1059 aaPredicted RBP9.93□□□□□ -0.82
CTC1-213ENST00000584842 TTLL5Q6EMB2 1281 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 TXNRD3Q86VQ6 643 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 CNTROBQ8N137 903 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 KLHDC4Q8TBB5 520 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 SIL1Q9H173 461 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 CD209Q9NNX6 404 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 KCNQ5Q9NR82 932 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 HDAC9Q9UKV0 1011 aa9.93□□□□□ -0.82
CTC1-213ENST00000584842 IL1R1P14778 569 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 HIBADHP31937 336 aaKnown RBP9.92□□□□□ -0.82
CTC1-213ENST00000584842 IL15P40933 162 aaPredicted RBP9.92□□□□□ -0.82
CTC1-213ENST00000584842 RFX5P48382 616 aaPredicted RBP9.92□□□□□ -0.82
CTC1-213ENST00000584842 GTF2IP78347 998 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 PTPN12Q05209 780 aaKnown RBP9.92□□□□□ -0.82
CTC1-213ENST00000584842 MTX1Q13505 466 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 TBC1D10BQ4KMP7 808 aaPredicted RBP9.92□□□□□ -0.82
CTC1-213ENST00000584842 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 TRPM4Q8TD43 1214 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 CHMP4BQ9H444 224 aaKnown RBP9.92□□□□□ -0.82
CTC1-213ENST00000584842 CREBZFQ9NS37 354 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 TNNQ9UQP3 1299 aa9.92□□□□□ -0.82
CTC1-213ENST00000584842 PASKQ96RG2 1323 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 IRS2Q9Y4H2 1338 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 TMEM88BA6NKF7 163 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 SNAP23O00161 211 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 GYG1P46976 350 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 ZNF280AP59817 542 aaPredicted RBP9.91□□□□□ -0.82
CTC1-213ENST00000584842 RBM26Q5T8P6 1007 aaKnown RBP9.91□□□□□ -0.82
CTC1-213ENST00000584842 SAMD7Q7Z3H4 446 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 VGLL2Q8N8G2 317 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 LPIN2Q92539 896 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 DCPSQ96C86 337 aaKnown RBP9.91□□□□□ -0.82
CTC1-213ENST00000584842 YTHDC1Q96MU7 727 aaKnown RBP9.91□□□□□ -0.82
CTC1-213ENST00000584842 MYOZ2Q9NPC6 264 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 COPRSQ9NQ92 184 aa9.91□□□□□ -0.82
CTC1-213ENST00000584842 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
CTC1-213ENST00000584842 ITGBL1O95965 494 aaPredicted RBP9.9□□□□□ -0.82
CTC1-213ENST00000584842 FKBP1AP62942 108 aaKnown RBP9.9□□□□□ -0.82
CTC1-213ENST00000584842 ATP2B3Q16720 1220 aa9.9□□□□□ -0.82
CTC1-213ENST00000584842 CDC37L1Q7L3B6 337 aa9.9□□□□□ -0.82
CTC1-213ENST00000584842 KIAA0825Q8IV33 1275 aa9.9□□□□□ -0.82
CTC1-213ENST00000584842 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
CTC1-213ENST00000584842 GNL3LQ9NVN8 582 aaKnown RBP9.9□□□□□ -0.82
CTC1-213ENST00000584842 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
CTC1-213ENST00000584842 FAM205AQ6ZU69 1335 aa9.89□□□□□ -0.83
CTC1-213ENST00000584842 SASH1O94885 1247 aa9.89□□□□□ -0.83
CTC1-213ENST00000584842 RLBP1P12271 317 aa9.89□□□□□ -0.83
CTC1-213ENST00000584842 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
CTC1-213ENST00000584842 G3BP1Q13283 466 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTC1-213ENST00000584842 OS9Q13438 667 aaPredicted RBP9.89□□□□□ -0.83
CTC1-213ENST00000584842 MVPQ14764 893 aaKnown RBP9.89□□□□□ -0.83
CTC1-213ENST00000584842 ATG9AQ7Z3C6 839 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms