RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	ARMC10	Q8N2F6	343 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	EDEM1	Q92611	657 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	CEP41	Q9BYV8	373 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	SH2B1	Q9NRF2	756 aa	Predicted RBP	6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	KANSL3	Q9P2N6	904 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	RAX	Q9Y2V3	346 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	KRTAP9-6	A0A140TA67	174 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	GSC2	O15499	205 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	ADAM11	O75078	769 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	PDGFA	P04085	211 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	CDC25B	P30305	580 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	FAM117B	Q6P1L5	589 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	C1orf127	Q8N9H9	656 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	WNT8B	Q93098	351 aa		6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	FAM46A	Q96IP4	442 aa	Known RBP	6.14	□□□□□ -1.43
VAPA-208	ENST00000584796	TMEM88B	A6NKF7	163 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796		H3BRJ5	948 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	DHX15	O43143	795 aa	Known RBP	6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	ACPP	P15309	386 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	MZF1	P28698	734 aa	Predicted RBP	6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	EIF1AX	P47813	144 aa	Known RBP	6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	CD97	P48960	835 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	PIP4K2B	P78356	416 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	DNM1	Q05193	864 aa	Known RBP	6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	DUOXA2	Q1HG44	320 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	NOM1	Q5C9Z4	860 aa	Known RBP	6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	KLHDC7B	Q96G42	594 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	CHRD	Q9H2X0	955 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	GGNBP2	Q9H3C7	697 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	SEC31B	Q9NQW1	1179 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	DZANK1	Q9NVP4	752 aa		6.13	□□□□□ -1.43
VAPA-208	ENST00000584796	ARID3C	A6NKF2	412 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	DDX3Y	O15523	660 aa	Known RBP	6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	IGLV1-40	P01703	118 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	PCSK2	P16519	638 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	CES1	P23141	567 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	MPST	P25325	297 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	SSFA2	P28290	1259 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	UBASH3B	Q8TF42	649 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	OSGEP	Q9NPF4	335 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796	STOML1	Q9UBI4	398 aa		6.12	□□□□□ -1.43
VAPA-208	ENST00000584796		A6NHS1	94 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	FAM177B	A6PVY3	158 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	PDE2A	O00408	941 aa	Predicted RBP	6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	NPR3	P17342	541 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	PMEPA1	Q969W9	287 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	UTP4	Q969X6	686 aa	Known RBP	6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	MYRFL	Q96LU7	910 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	HHIP	Q96QV1	700 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	PCMTD2	Q9NV79	361 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	SOX13	Q9UN79	622 aa		6.11	□□□□□ -1.43
VAPA-208	ENST00000584796	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	SSTR4	P31391	388 aa		6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	CABP4	P57796	275 aa		6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	ALKBH2	Q6NS38	261 aa		6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	ZDHHC13	Q8IUH4	622 aa		6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	C7orf69	Q9H7B7	122 aa		6.1	□□□□□ -1.43
VAPA-208	ENST00000584796	TRPA1	O75762	1119 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	PPP1R15A	O75807	674 aa	Predicted RBP	6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	NFIA	Q12857	509 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	MTMR3	Q13615	1198 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	C8orf34	Q49A92	452 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	ANKRD34A	Q69YU3	496 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	FAM20C	Q8IXL6	584 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	KRTAP4-12	Q9BQ66	201 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	POLI	Q9UNA4	740 aa		6.09	□□□□□ -1.43
VAPA-208	ENST00000584796	TNFRSF21	O75509	655 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	MED26	O95402	600 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	TGFB1	P01137	390 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	RNF43	Q68DV7	783 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	TRIM42	Q8IWZ5	723 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	CCDC82	Q8N4S0	544 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	TTC16	Q8NEE8	873 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	NXPE3	Q969Y0	559 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	OSMR	Q99650	979 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	ZKSCAN3	Q9BRR0	538 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	RNF208	Q9H0X6	261 aa		6.08	□□□□□ -1.44
VAPA-208	ENST00000584796	HMX2	A2RU54	273 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	MEGF11	A6BM72	1044 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	EREG	O14944	169 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	COBL	O75128	1261 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	PREP	P48147	710 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	NLRP12	P59046	1061 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	PHLDB3	Q6NSJ2	640 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	VN1R5	Q7Z5H4	357 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	CLEC10A	Q8IUN9	316 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	SNX29	Q8TEQ0	813 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	BSND	Q8WZ55	320 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	DBNDD2	Q9BQY9	259 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	HIF3A	Q9Y2N7	669 aa		6.07	□□□□□ -1.44
VAPA-208	ENST00000584796	FZD6	O60353	706 aa		6.06	□□□□□ -1.44
VAPA-208	ENST00000584796	PHACTR2	O75167	634 aa		6.06	□□□□□ -1.44
VAPA-208	ENST00000584796	FAM13A	O94988	1023 aa		6.06	□□□□□ -1.44
VAPA-208	ENST00000584796	EDN3	P14138	238 aa		6.06	□□□□□ -1.44
VAPA-208	ENST00000584796	USP5	P45974	858 aa		6.06	□□□□□ -1.44

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