RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 BBOX1O75936 387 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 PDE6BP35913 854 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
UBBP4-202ENST00000584755 TMC4Q7Z404 712 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 DDRGK1Q96HY6 314 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
UBBP4-202ENST00000584755 KIF2CQ99661 725 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
UBBP4-202ENST00000584755 MED23Q9ULK4 1368 aa16.92■□□□□ 0.3
UBBP4-202ENST00000584755 IRS2Q9Y4H2 1338 aa16.92■□□□□ 0.3
UBBP4-202ENST00000584755 SRGNP10124 158 aa16.92■□□□□ 0.3
UBBP4-202ENST00000584755 ZAP70P43403 619 aa16.92■□□□□ 0.3
UBBP4-202ENST00000584755 LSG1Q9H089 658 aaKnown RBP16.92■□□□□ 0.3
UBBP4-202ENST00000584755 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 NPR1P16066 1061 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBBP4-202ENST00000584755 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 ANTXR1Q9H6X2 564 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 LEMD3Q9Y2U8 911 aa16.91■□□□□ 0.3
UBBP4-202ENST00000584755 XDHP47989 1333 aa16.9■□□□□ 0.3
UBBP4-202ENST00000584755 WTIPA6NIX2 430 aaPredicted RBP16.9■□□□□ 0.3
UBBP4-202ENST00000584755 BCAMP50895 628 aa16.9■□□□□ 0.3
UBBP4-202ENST00000584755 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
UBBP4-202ENST00000584755 TTF1Q15361 905 aaPredicted RBP16.9■□□□□ 0.3
UBBP4-202ENST00000584755 PI16Q6UXB8 463 aa16.9■□□□□ 0.3
UBBP4-202ENST00000584755 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
UBBP4-202ENST00000584755 PDGFDQ9GZP0 370 aaPredicted RBP16.9■□□□□ 0.3
UBBP4-202ENST00000584755 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
UBBP4-202ENST00000584755 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
UBBP4-202ENST00000584755 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
UBBP4-202ENST00000584755 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
UBBP4-202ENST00000584755 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
UBBP4-202ENST00000584755 SPATA5Q8NB90 893 aa16.89■□□□□ 0.29
UBBP4-202ENST00000584755 FAM84BQ96KN1 310 aaPredicted RBP16.89■□□□□ 0.29
UBBP4-202ENST00000584755 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
UBBP4-202ENST00000584755 RNF113AO15541 343 aaKnown RBP16.88■□□□□ 0.29
UBBP4-202ENST00000584755 ZFYP08048 801 aaPredicted RBP16.88■□□□□ 0.29
UBBP4-202ENST00000584755 ZMYM1Q5SVZ6 1142 aa16.88■□□□□ 0.29
UBBP4-202ENST00000584755 HELLSQ9NRZ9 838 aa16.88■□□□□ 0.29
UBBP4-202ENST00000584755 PODXL2Q9NZ53 605 aa16.88■□□□□ 0.29
UBBP4-202ENST00000584755 MYH7P12883 1935 aa16.88■□□□□ 0.29
UBBP4-202ENST00000584755 ALDH1B1P30837 517 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 KCNJ4P48050 445 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 ANAPC15P60006 121 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 CAVIN4Q5BKX8 364 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 GNL3LQ9NVN8 582 aaKnown RBP16.87■□□□□ 0.29
UBBP4-202ENST00000584755 PDS5AQ29RF7 1337 aaKnown RBP16.87■□□□□ 0.29
UBBP4-202ENST00000584755 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
UBBP4-202ENST00000584755 SEMA3EO15041 775 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 HSPA4P34932 840 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 GYG1P46976 350 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 MCMDC2Q4G0Z9 681 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 KIAA1211Q6ZU35 1233 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 UPF1Q92900 1129 aaKnown RBP eCLIP16.86■□□□□ 0.291e-8■□□□□ 10.4
UBBP4-202ENST00000584755 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
UBBP4-202ENST00000584755 CHGBP05060 677 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 MCCP23508 829 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 KLRK1P26718 216 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 GPSM2P81274 684 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
UBBP4-202ENST00000584755 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
UBBP4-202ENST00000584755 ANKIB1Q9P2G1 1089 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 ATP6V0A2Q9Y487 856 aa16.86■□□□□ 0.29
UBBP4-202ENST00000584755 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
UBBP4-202ENST00000584755 ATP2B4P23634 1241 aa16.85■□□□□ 0.29
UBBP4-202ENST00000584755 PTH1RQ03431 593 aa16.85■□□□□ 0.29
UBBP4-202ENST00000584755 ZSCAN25Q6NSZ9 544 aa16.85■□□□□ 0.29
UBBP4-202ENST00000584755 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
UBBP4-202ENST00000584755 KCNB2Q92953 911 aa16.85■□□□□ 0.29
UBBP4-202ENST00000584755 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.85■□□□□ 0.29
UBBP4-202ENST00000584755 DENND2AQ9ULE3 1009 aa16.85■□□□□ 0.29
UBBP4-202ENST00000584755 MYO5AQ9Y4I1 1855 aaKnown RBP16.84■□□□□ 0.29
UBBP4-202ENST00000584755 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
UBBP4-202ENST00000584755 ADD2P35612 726 aa16.84■□□□□ 0.29
UBBP4-202ENST00000584755 RABEP1Q15276 862 aa16.84■□□□□ 0.29
UBBP4-202ENST00000584755 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
UBBP4-202ENST00000584755 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
UBBP4-202ENST00000584755 H0YIN7 160 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 UBE3CQ15386 1083 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 TXNRD3Q86VQ6 643 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 VPS37DQ86XT2 251 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 APPBP2Q92624 585 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 SNX21Q969T3 373 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 GGA1Q9UJY5 639 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 PALD1Q9ULE6 856 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 MAST3O60307 1309 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 DLEC1Q9Y238 1755 aa16.83■□□□□ 0.28
UBBP4-202ENST00000584755 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
UBBP4-202ENST00000584755 DUOX1Q9NRD9 1551 aa16.82■□□□□ 0.28
UBBP4-202ENST00000584755 NECTIN1Q15223 517 aa16.82■□□□□ 0.28
UBBP4-202ENST00000584755 OSBP2Q969R2 916 aa16.82■□□□□ 0.28
UBBP4-202ENST00000584755 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms