RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 GMLQ99445 158 aa20.78■□□□□ 0.92
LIMD2-212ENST00000584645 USP44Q9H0E7 712 aa20.78■□□□□ 0.92
LIMD2-212ENST00000584645 BICC1Q9H694 974 aaKnown RBP20.78■□□□□ 0.92
LIMD2-212ENST00000584645 CNNM1Q9NRU3 951 aa20.78■□□□□ 0.92
LIMD2-212ENST00000584645 NOB1Q9ULX3 412 aaKnown RBP20.78■□□□□ 0.92
LIMD2-212ENST00000584645 MMP14P50281 582 aa20.77■□□□□ 0.92
LIMD2-212ENST00000584645 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
LIMD2-212ENST00000584645 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
LIMD2-212ENST00000584645 SAMD7Q7Z3H4 446 aa20.77■□□□□ 0.92
LIMD2-212ENST00000584645 TXNRD3Q86VQ6 643 aa20.77■□□□□ 0.92
LIMD2-212ENST00000584645 ANKRD44Q8N8A2 993 aa20.77■□□□□ 0.92
LIMD2-212ENST00000584645 IRS2Q9Y4H2 1338 aa20.77■□□□□ 0.91
LIMD2-212ENST00000584645 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
LIMD2-212ENST00000584645 KIF4BQ2VIQ3 1234 aa20.76■□□□□ 0.91
LIMD2-212ENST00000584645 TBC1D10BQ4KMP7 808 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-212ENST00000584645 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-212ENST00000584645 RASSF10A6NK89 507 aa20.75■□□□□ 0.91
LIMD2-212ENST00000584645 TAF5LO75529 589 aa20.75■□□□□ 0.91
LIMD2-212ENST00000584645 KLRK1P26718 216 aa20.75■□□□□ 0.91
LIMD2-212ENST00000584645 DACT2Q5SW24 774 aa20.75■□□□□ 0.91
LIMD2-212ENST00000584645 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
LIMD2-212ENST00000584645 HDAC5Q9UQL6 1122 aa20.75■□□□□ 0.91
LIMD2-212ENST00000584645 MROH5Q6ZUA9 1318 aa20.75■□□□□ 0.91
LIMD2-212ENST00000584645 USP17L8P0C7I0 530 aa20.74■□□□□ 0.91
LIMD2-212ENST00000584645 GLIS2Q9BZE0 524 aaPredicted RBP20.74■□□□□ 0.91
LIMD2-212ENST00000584645 CD209Q9NNX6 404 aa20.74■□□□□ 0.91
LIMD2-212ENST00000584645 TRAF5O00463 557 aa20.73■□□□□ 0.91
LIMD2-212ENST00000584645 EGFRP00533 1210 aa20.73■□□□□ 0.91
LIMD2-212ENST00000584645 UBE4AQ14139 1066 aa20.73■□□□□ 0.91
LIMD2-212ENST00000584645 ZNF804AQ7Z570 1209 aa20.73■□□□□ 0.91
LIMD2-212ENST00000584645 HELBQ8NG08 1087 aaPredicted RBP20.73■□□□□ 0.91
LIMD2-212ENST00000584645 IPO8O15397 1037 aaKnown RBP20.72■□□□□ 0.91
LIMD2-212ENST00000584645 DEFB115Q30KQ5 88 aa20.72■□□□□ 0.91
LIMD2-212ENST00000584645 CST9Q5W186 159 aa20.72■□□□□ 0.91
LIMD2-212ENST00000584645 TTLL5Q6EMB2 1281 aa20.72■□□□□ 0.91
LIMD2-212ENST00000584645 DCPSQ96C86 337 aaKnown RBP20.72■□□□□ 0.91
LIMD2-212ENST00000584645 ABT1Q9ULW3 272 aaKnown RBP20.72■□□□□ 0.91
LIMD2-212ENST00000584645 RIPOR2Q9Y4F9 1068 aa20.72■□□□□ 0.91
LIMD2-212ENST00000584645 UBTFL1P0CB47 393 aaPredicted RBP20.71■□□□□ 0.91
LIMD2-212ENST00000584645 IL1R1P14778 569 aa20.71■□□□□ 0.91
LIMD2-212ENST00000584645 RBM26Q5T8P6 1007 aaKnown RBP20.71■□□□□ 0.91
LIMD2-212ENST00000584645 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
LIMD2-212ENST00000584645 MYOZ2Q9NPC6 264 aa20.71■□□□□ 0.91
LIMD2-212ENST00000584645 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
LIMD2-212ENST00000584645 POLR2AP24928 1970 aaKnown RBP20.7■□□□□ 0.9
LIMD2-212ENST00000584645 CELF2O95319 508 aaKnown RBP20.7■□□□□ 0.9
LIMD2-212ENST00000584645 FKBP1AP62942 108 aaKnown RBP20.7■□□□□ 0.9
LIMD2-212ENST00000584645 FMR1Q06787 632 aaKnown RBP eCLIP20.7■□□□□ 0.9
LIMD2-212ENST00000584645 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
LIMD2-212ENST00000584645 KRT26Q7Z3Y9 468 aa20.7■□□□□ 0.9
LIMD2-212ENST00000584645 FBXW7Q969H0 707 aa20.7■□□□□ 0.9
LIMD2-212ENST00000584645 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
LIMD2-212ENST00000584645 PITPNM2Q9BZ72 1349 aa20.7■□□□□ 0.9
LIMD2-212ENST00000584645 THSD7BQ9C0I4 1608 aa20.7■□□□□ 0.9
LIMD2-212ENST00000584645 SNAP23O00161 211 aa20.69■□□□□ 0.9
LIMD2-212ENST00000584645 PLIN1O60240 522 aa20.69■□□□□ 0.9
LIMD2-212ENST00000584645 GTF2IP78347 998 aa20.69■□□□□ 0.9
LIMD2-212ENST00000584645 HHIPL1Q96JK4 782 aa20.69■□□□□ 0.9
LIMD2-212ENST00000584645 PUS3Q9BZE2 481 aaKnown RBP20.69■□□□□ 0.9
LIMD2-212ENST00000584645 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
LIMD2-212ENST00000584645 VEGFBP49765 207 aa20.68■□□□□ 0.9
LIMD2-212ENST00000584645 USP48Q86UV5 1035 aa20.68■□□□□ 0.9
LIMD2-212ENST00000584645 SULF1Q8IWU6 871 aa20.68■□□□□ 0.9
LIMD2-212ENST00000584645 HDAC9Q9UKV0 1011 aa20.68■□□□□ 0.9
LIMD2-212ENST00000584645 ECE1P42892 770 aa20.67■□□□□ 0.9
LIMD2-212ENST00000584645 RFX5P48382 616 aaPredicted RBP20.67■□□□□ 0.9
LIMD2-212ENST00000584645 SCARF1Q14162 830 aa20.67■□□□□ 0.9
LIMD2-212ENST00000584645 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
LIMD2-212ENST00000584645 ATF7IPQ6VMQ6 1270 aa20.67■□□□□ 0.9
LIMD2-212ENST00000584645 FBXO3Q9UK99 471 aa20.67■□□□□ 0.9
LIMD2-212ENST00000584645 HSPA1AP0DMV8 641 aaKnown RBP20.66■□□□□ 0.9
LIMD2-212ENST00000584645 HSPA1BP0DMV9 641 aaKnown RBP20.66■□□□□ 0.9
LIMD2-212ENST00000584645 LRRC24Q50LG9 513 aa20.66■□□□□ 0.9
LIMD2-212ENST00000584645 SAPCD2Q86UD0 394 aa20.66■□□□□ 0.9
LIMD2-212ENST00000584645 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
LIMD2-212ENST00000584645 MXD3Q9BW11 206 aa20.66■□□□□ 0.9
LIMD2-212ENST00000584645 ARAP2Q8WZ64 1704 aa20.66■□□□□ 0.9
LIMD2-212ENST00000584645 FAM205AQ6ZU69 1335 aa20.65■□□□□ 0.9
LIMD2-212ENST00000584645 WDR33Q9C0J8 1336 aaKnown RBP20.65■□□□□ 0.9
LIMD2-212ENST00000584645 PDE8BO95263 885 aa20.65■□□□□ 0.9
LIMD2-212ENST00000584645 GNAI3P08754 354 aa20.65■□□□□ 0.9
LIMD2-212ENST00000584645 TRIM27P14373 513 aa20.65■□□□□ 0.9
LIMD2-212ENST00000584645 HIBADHP31937 336 aaKnown RBP20.65■□□□□ 0.9
LIMD2-212ENST00000584645 ANGEL2Q5VTE6 544 aaKnown RBP20.65■□□□□ 0.9
LIMD2-212ENST00000584645 ADM5C9JUS6 153 aa20.64■□□□□ 0.89
LIMD2-212ENST00000584645 EYA2O00167 538 aa20.64■□□□□ 0.89
LIMD2-212ENST00000584645 BCAR3O75815 825 aa20.64■□□□□ 0.89
LIMD2-212ENST00000584645 SASH1O94885 1247 aa20.64■□□□□ 0.89
LIMD2-212ENST00000584645 PTPN12Q05209 780 aaKnown RBP20.64■□□□□ 0.89
LIMD2-212ENST00000584645 TDRD7Q8NHU6 1098 aaKnown RBP20.64■□□□□ 0.89
LIMD2-212ENST00000584645 ZNF408Q9H9D4 720 aa20.64■□□□□ 0.89
LIMD2-212ENST00000584645 ASTN2O75129 1339 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-212ENST00000584645 ECM29Q5VYK3 1845 aa20.63■□□□□ 0.89
LIMD2-212ENST00000584645 WNT10BO00744 389 aa20.63■□□□□ 0.89
LIMD2-212ENST00000584645 CIAO1O76071 339 aa20.63■□□□□ 0.89
LIMD2-212ENST00000584645 KIAA0825Q8IV33 1275 aa20.63■□□□□ 0.89
LIMD2-212ENST00000584645 KLHDC4Q8TBB5 520 aa20.63■□□□□ 0.89
LIMD2-212ENST00000584645 FAM84BQ96KN1 310 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-212ENST00000584645 CAPNS2Q96L46 248 aa20.63■□□□□ 0.89
LIMD2-212ENST00000584645 MEIS3Q99687 375 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms