RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 USP31Q70CQ4 1352 aa13.89□□□□□ -0.19
ERBB2-218ENST00000584450 SNAP23O00161 211 aa13.89□□□□□ -0.19
ERBB2-218ENST00000584450 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
ERBB2-218ENST00000584450 MAGEB6Q8N7X4 407 aa13.89□□□□□ -0.19
ERBB2-218ENST00000584450 TNNT1P13805 278 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 AMOTL1Q8IY63 956 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 NOL7Q9UMY1 257 aaKnown RBP13.88□□□□□ -0.19
ERBB2-218ENST00000584450 GPAA1O43292 621 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 OFD1O75665 1012 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 LMOD1P29536 600 aaPredicted RBP13.88□□□□□ -0.19
ERBB2-218ENST00000584450 PHKBQ93100 1093 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 TAF6LQ9Y6J9 622 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 RGS12O14924 1447 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
ERBB2-218ENST00000584450 NR1I2O75469 434 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 UVSSAQ2YD98 709 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
ERBB2-218ENST00000584450 TMEM131LA2VDJ0 1609 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 E7EWF7 191 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 ZBTB43O43298 467 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
ERBB2-218ENST00000584450 MFSD6Q6ZSS7 791 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 MNS1Q8NEH6 495 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
ERBB2-218ENST00000584450 COPRSQ9NQ92 184 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 SLC4A4Q9Y6R1 1079 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
ERBB2-218ENST00000584450 CYP7A1P22680 504 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 KCNQ4P56696 695 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.87□□□□□ -0.198e-7■□□□□ 9.9
ERBB2-218ENST00000584450 V9GYY5 206 aaPredicted RBP13.87□□□□□ -0.19
ERBB2-218ENST00000584450 PREX1Q8TCU6 1659 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
ERBB2-218ENST00000584450 CBX1P83916 185 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 CNNM3Q8NE01 707 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 CPLX3Q8WVH0 158 aa13.87□□□□□ -0.19
ERBB2-218ENST00000584450 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
ERBB2-218ENST00000584450 DHX8Q14562 1220 aaKnown RBP13.86□□□□□ -0.19
ERBB2-218ENST00000584450 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-218ENST00000584450 PRDM1O75626 825 aa13.86□□□□□ -0.19
ERBB2-218ENST00000584450 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
ERBB2-218ENST00000584450 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
ERBB2-218ENST00000584450 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
ERBB2-218ENST00000584450 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
ERBB2-218ENST00000584450 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
ERBB2-218ENST00000584450 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 MBD4O95243 580 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-218ENST00000584450 STX1AQ16623 288 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
ERBB2-218ENST00000584450 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 GJB4Q9NTQ9 266 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 SPTLC2O15270 562 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 TPM1P09493 284 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 SFPQP23246 707 aaKnown RBP eCLIP13.85□□□□□ -0.19
ERBB2-218ENST00000584450 TCIRG1Q13488 830 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 CBX8Q9HC52 389 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 CEP170BQ9Y4F5 1589 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-218ENST00000584450 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 DDB1Q16531 1140 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 HAUS7Q99871 368 aa13.85□□□□□ -0.19
ERBB2-218ENST00000584450 CDC42BPGQ6DT37 1551 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
ERBB2-218ENST00000584450 SCRN1Q12765 414 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 ANKIB1Q9P2G1 1089 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 SYKP43405 635 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 TTF1Q15361 905 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-218ENST00000584450 TSR1Q2NL82 804 aaKnown RBP13.84□□□□□ -0.19
ERBB2-218ENST00000584450 ZNF771Q7L3S4 317 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-218ENST00000584450 GREM2Q9H772 168 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 HELLSQ9NRZ9 838 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 AK9Q5TCS8 1911 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 CLSTN1O94985 981 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 FGAP02671 866 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 CTDSPL2Q05D32 466 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 LRMPQ12912 555 aa13.84□□□□□ -0.19
ERBB2-218ENST00000584450 SKILP12757 684 aa13.83□□□□□ -0.2
ERBB2-218ENST00000584450 WTAPQ15007 396 aa13.83□□□□□ -0.2
ERBB2-218ENST00000584450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
ERBB2-218ENST00000584450 AFMP43652 599 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 PDE4CQ08493 712 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 APPBP2Q92624 585 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 CTAGE5O15320 804 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-218ENST00000584450 ZPR1O75312 459 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-218ENST00000584450 USP5P45974 858 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 PDCL2Q8N4E4 241 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 OSBP2Q969R2 916 aa13.82□□□□□ -0.2
ERBB2-218ENST00000584450 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms