RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 ZNF646O15015 1829 aaPredicted RBP21.28■■□□□ 1
ITGB4-211ENST00000584374 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
ITGB4-211ENST00000584374 RLBP1P12271 317 aa21.28■■□□□ 1
ITGB4-211ENST00000584374 CCDC57Q2TAC2 916 aa21.28■■□□□ 1
ITGB4-211ENST00000584374 MAP1SQ66K74 1059 aaPredicted RBP21.28■■□□□ 1
ITGB4-211ENST00000584374 ANKRD2Q9GZV1 360 aa21.28■■□□□ 1
ITGB4-211ENST00000584374 ZNF804BA4D1E1 1349 aa21.28■■□□□ 1
ITGB4-211ENST00000584374 PSME4Q14997 1843 aa21.27■■□□□ 1
ITGB4-211ENST00000584374 SNAP23O00161 211 aa21.27■■□□□ 1
ITGB4-211ENST00000584374 HIRAP54198 1017 aaPredicted RBP21.27■■□□□ 1
ITGB4-211ENST00000584374 C20orf194Q5TEA3 1177 aa21.27■■□□□ 1
ITGB4-211ENST00000584374 TRPM4Q8TD43 1214 aa21.27■■□□□ 1
ITGB4-211ENST00000584374 DPF2Q92785 391 aa21.27■■□□□ 1
ITGB4-211ENST00000584374 GNAI3P08754 354 aa21.26■□□□□ 0.99
ITGB4-211ENST00000584374 MICALL2Q8IY33 904 aa21.26■□□□□ 0.99
ITGB4-211ENST00000584374 CNTROBQ8N137 903 aa21.26■□□□□ 0.99
ITGB4-211ENST00000584374 CNOT7Q9UIV1 285 aaKnown RBP21.26■□□□□ 0.99
ITGB4-211ENST00000584374 CLEC11AQ9Y240 323 aa21.26■□□□□ 0.99
ITGB4-211ENST00000584374 TAF5LO75529 589 aa21.25■□□□□ 0.99
ITGB4-211ENST00000584374 RPS12P25398 132 aaKnown RBP21.25■□□□□ 0.99
ITGB4-211ENST00000584374 IRX6P78412 446 aaPredicted RBP21.25■□□□□ 0.99
ITGB4-211ENST00000584374 PODNQ7Z5L7 613 aa21.25■□□□□ 0.99
ITGB4-211ENST00000584374 HELBQ8NG08 1087 aaPredicted RBP21.25■□□□□ 0.99
ITGB4-211ENST00000584374 EGFRP00533 1210 aa21.24■□□□□ 0.99
ITGB4-211ENST00000584374 UBTFL1P0CB47 393 aaPredicted RBP21.24■□□□□ 0.99
ITGB4-211ENST00000584374 LDHAL6AQ6ZMR3 332 aa21.24■□□□□ 0.99
ITGB4-211ENST00000584374 CRBNQ96SW2 442 aa21.24■□□□□ 0.99
ITGB4-211ENST00000584374 GMLQ99445 158 aa21.24■□□□□ 0.99
ITGB4-211ENST00000584374 PUS3Q9BZE2 481 aaKnown RBP21.24■□□□□ 0.99
ITGB4-211ENST00000584374 PGAP2Q9UHJ9 254 aa21.24■□□□□ 0.99
ITGB4-211ENST00000584374 C15orf52Q6ZUT6 534 aaKnown RBP21.23■□□□□ 0.99
ITGB4-211ENST00000584374 COA1Q9GZY4 146 aa21.23■□□□□ 0.99
ITGB4-211ENST00000584374 G3V3G9 751 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 FMR1Q06787 632 aaKnown RBP eCLIP21.22■□□□□ 0.99
ITGB4-211ENST00000584374 AAMPQ13685 434 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 DCAF8Q5TAQ9 597 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 RSBN1LQ6PCB5 846 aaPredicted RBP21.22■□□□□ 0.99
ITGB4-211ENST00000584374 SAMD7Q7Z3H4 446 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 KLRG1Q96E93 195 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 CREBZFQ9NS37 354 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 RIPOR2Q9Y4F9 1068 aa21.22■□□□□ 0.99
ITGB4-211ENST00000584374 TAF7LQ5H9L4 462 aa21.21■□□□□ 0.99
ITGB4-211ENST00000584374 DACT2Q5SW24 774 aa21.21■□□□□ 0.99
ITGB4-211ENST00000584374 CNNM1Q9NRU3 951 aa21.21■□□□□ 0.99
ITGB4-211ENST00000584374 USP17L3A6NCW0 530 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 USP17L4A6NCW7 530 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 H7C1D1 291 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 RFX5P48382 616 aaPredicted RBP21.2■□□□□ 0.98
ITGB4-211ENST00000584374 ZNF280AP59817 542 aaPredicted RBP21.2■□□□□ 0.98
ITGB4-211ENST00000584374 USP17L1Q7RTZ2 530 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 AGBL3Q8NEM8 1001 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 KLHDC4Q8TBB5 520 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 MEIS3Q99687 375 aa21.2■□□□□ 0.98
ITGB4-211ENST00000584374 TRAF5O00463 557 aa21.19■□□□□ 0.98
ITGB4-211ENST00000584374 TBC1D10BQ4KMP7 808 aaPredicted RBP21.19■□□□□ 0.98
ITGB4-211ENST00000584374 LRRC24Q50LG9 513 aa21.19■□□□□ 0.98
ITGB4-211ENST00000584374 ZC3H15Q8WU90 426 aaKnown RBP21.19■□□□□ 0.98
ITGB4-211ENST00000584374 MXD3Q9BW11 206 aa21.19■□□□□ 0.98
ITGB4-211ENST00000584374 GNAI2P04899 355 aa21.18■□□□□ 0.98
ITGB4-211ENST00000584374 KCNJ4P48050 445 aa21.18■□□□□ 0.98
ITGB4-211ENST00000584374 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
ITGB4-211ENST00000584374 JMYQ8N9B5 988 aa21.18■□□□□ 0.98
ITGB4-211ENST00000584374 CD209Q9NNX6 404 aa21.18■□□□□ 0.98
ITGB4-211ENST00000584374 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
ITGB4-211ENST00000584374 STRIP1Q5VSL9 837 aa21.17■□□□□ 0.98
ITGB4-211ENST00000584374 TMEM88BA6NKF7 163 aa21.16■□□□□ 0.98
ITGB4-211ENST00000584374 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
ITGB4-211ENST00000584374 GLIS2Q9BZE0 524 aaPredicted RBP21.16■□□□□ 0.98
ITGB4-211ENST00000584374 ASTN2O75129 1339 aaPredicted RBP21.15■□□□□ 0.98
ITGB4-211ENST00000584374 MROH5Q6ZUA9 1318 aa21.15■□□□□ 0.98
ITGB4-211ENST00000584374 IL1R1P14778 569 aa21.15■□□□□ 0.98
ITGB4-211ENST00000584374 PTPN12Q05209 780 aaKnown RBP21.15■□□□□ 0.98
ITGB4-211ENST00000584374 UBE4AQ14139 1066 aa21.15■□□□□ 0.98
ITGB4-211ENST00000584374 KIF4BQ2VIQ3 1234 aa21.15■□□□□ 0.98
ITGB4-211ENST00000584374 CST9Q5W186 159 aa21.15■□□□□ 0.98
ITGB4-211ENST00000584374 LRRFIP2Q9Y608 721 aaKnown RBP21.15■□□□□ 0.98
ITGB4-211ENST00000584374 CNTNAP1P78357 1384 aa21.14■□□□□ 0.98
ITGB4-211ENST00000584374 USP17L8P0C7I0 530 aa21.14■□□□□ 0.97
ITGB4-211ENST00000584374 PCNTO95613 3336 aa21.14■□□□□ 0.97
ITGB4-211ENST00000584374 GTF2IP78347 998 aa21.13■□□□□ 0.97
ITGB4-211ENST00000584374 RBM26Q5T8P6 1007 aaKnown RBP21.13■□□□□ 0.97
ITGB4-211ENST00000584374 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
ITGB4-211ENST00000584374 TTLL5Q6EMB2 1281 aa21.13■□□□□ 0.97
ITGB4-211ENST00000584374 CERS5Q8N5B7 392 aa21.13■□□□□ 0.97
ITGB4-211ENST00000584374 ZBTB40Q9NUA8 1239 aa21.13■□□□□ 0.97
ITGB4-211ENST00000584374 MYO3BQ8WXR4 1341 aa21.12■□□□□ 0.97
ITGB4-211ENST00000584374 DLK2Q6UY11 383 aa21.12■□□□□ 0.97
ITGB4-211ENST00000584374 ATG9AQ7Z3C6 839 aa21.12■□□□□ 0.97
ITGB4-211ENST00000584374 ZNF804AQ7Z570 1209 aa21.12■□□□□ 0.97
ITGB4-211ENST00000584374 FAM84BQ96KN1 310 aaPredicted RBP21.12■□□□□ 0.97
ITGB4-211ENST00000584374 MYOZ2Q9NPC6 264 aa21.12■□□□□ 0.97
ITGB4-211ENST00000584374 MKRN1Q9UHC7 482 aaKnown RBP21.12■□□□□ 0.97
ITGB4-211ENST00000584374 EYA2O00167 538 aa21.11■□□□□ 0.97
ITGB4-211ENST00000584374 PDE8BO95263 885 aa21.11■□□□□ 0.97
ITGB4-211ENST00000584374 METTL24Q5JXM2 366 aa21.11■□□□□ 0.97
ITGB4-211ENST00000584374 CDC37L1Q7L3B6 337 aa21.11■□□□□ 0.97
ITGB4-211ENST00000584374 FBXW7Q969H0 707 aa21.11■□□□□ 0.97
ITGB4-211ENST00000584374 C1orf115Q9H7X2 142 aa21.11■□□□□ 0.97
ITGB4-211ENST00000584374 TRPM7Q96QT4 1865 aa21.1■□□□□ 0.97
ITGB4-211ENST00000584374 RASSF10A6NK89 507 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms