RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SCAF8Q9UPN6 1271 aaKnown RBP14.5□□□□□ -0.09
CASC3-208ENST00000583649 RBBP6Q7Z6E9 1792 aaKnown RBP14.5□□□□□ -0.09
CASC3-208ENST00000583649 MYO1BO43795 1136 aa14.49□□□□□ -0.09
CASC3-208ENST00000583649 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
CASC3-208ENST00000583649 STRIP1Q5VSL9 837 aa14.49□□□□□ -0.09
CASC3-208ENST00000583649 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
CASC3-208ENST00000583649 DPF3Q92784 378 aa14.49□□□□□ -0.09
CASC3-208ENST00000583649 ZNF333Q96JL9 665 aa14.49□□□□□ -0.09
CASC3-208ENST00000583649 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.49□□□□□ -0.09
CASC3-208ENST00000583649 PPP2R3BQ9Y5P8 575 aa14.49□□□□□ -0.09
CASC3-208ENST00000583649 COL1A1P02452 1464 aaPredicted RBP14.49□□□□□ -0.09
CASC3-208ENST00000583649 CRHR2Q13324 411 aa14.48□□□□□ -0.09
CASC3-208ENST00000583649 KIF22Q14807 665 aa14.48□□□□□ -0.09
CASC3-208ENST00000583649 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
CASC3-208ENST00000583649 ZBTB38Q8NAP3 1195 aaPredicted RBP14.48□□□□□ -0.09
CASC3-208ENST00000583649 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
CASC3-208ENST00000583649 WNK4Q96J92 1243 aa14.48□□□□□ -0.09
CASC3-208ENST00000583649 ISCA1Q9BUE6 129 aa14.48□□□□□ -0.09
CASC3-208ENST00000583649 MKI67P46013 3256 aaKnown RBP14.47□□□□□ -0.09
CASC3-208ENST00000583649 ATP5J2-PTCD1G3V325 749 aa14.47□□□□□ -0.09
CASC3-208ENST00000583649 IREB2P48200 963 aaKnown RBP14.47□□□□□ -0.09
CASC3-208ENST00000583649 TRIM28Q13263 835 aaKnown RBP14.47□□□□□ -0.09
CASC3-208ENST00000583649 CDC5LQ99459 802 aaKnown RBP14.47□□□□□ -0.09
CASC3-208ENST00000583649 DBF4Q9UBU7 674 aaPredicted RBP14.47□□□□□ -0.09
CASC3-208ENST00000583649 TAF1P21675 1872 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 IGF2BP3O00425 579 aaKnown RBP eCLIP14.46□□□□□ -0.09
CASC3-208ENST00000583649 SASH1O94885 1247 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 MAP3K11Q16584 847 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 NKX2-3Q8TAU0 364 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 ZNF428Q96B54 188 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 HTATIP2Q9BUP3 242 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 COA1Q9GZY4 146 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 DEFB129Q9H1M3 183 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 HYPKQ9NX55 129 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 NR2E3Q9Y5X4 410 aa14.46□□□□□ -0.09
CASC3-208ENST00000583649 PDE8AO60658 829 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 GNRH1P01148 92 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 DACT2Q5SW24 774 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 HDGFL1Q5TGJ6 251 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 PLEKHF1Q96S99 279 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 CHPF2Q9P2E5 772 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 SCN9AQ15858 1988 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 MED23Q9ULK4 1368 aa14.45□□□□□ -0.1
CASC3-208ENST00000583649 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
CASC3-208ENST00000583649 RIPK4P57078 832 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 GOLGA2Q08379 1002 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 DLGAP5Q15398 846 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 TTLL5Q6EMB2 1281 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 RIC3Q7Z5B4 369 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 ANKRD13AQ8IZ07 590 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 SEC31BQ9NQW1 1179 aa14.44□□□□□ -0.1
CASC3-208ENST00000583649 HOXB7P09629 217 aa14.43□□□□□ -0.1
CASC3-208ENST00000583649 PRMT2P55345 433 aa14.43□□□□□ -0.1
CASC3-208ENST00000583649 RBM27Q9P2N5 1060 aaKnown RBP14.43□□□□□ -0.1
CASC3-208ENST00000583649 A0A1W2PPC1 479 aa14.42□□□□□ -0.1
CASC3-208ENST00000583649 KIAA0825Q8IV33 1275 aa14.42□□□□□ -0.1
CASC3-208ENST00000583649 CCDC191Q8NCU4 936 aa14.42□□□□□ -0.1
CASC3-208ENST00000583649 PTCH2Q9Y6C5 1203 aa14.42□□□□□ -0.1
CASC3-208ENST00000583649 KIAA0100Q14667 2235 aaKnown RBP14.42□□□□□ -0.1
CASC3-208ENST00000583649 PSME4Q14997 1843 aa14.41□□□□□ -0.1
CASC3-208ENST00000583649 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
CASC3-208ENST00000583649 TESPA1A2RU30 521 aaPredicted RBP14.41□□□□□ -0.1
CASC3-208ENST00000583649 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
CASC3-208ENST00000583649 TAF1CQ15572 869 aaPredicted RBP14.41□□□□□ -0.1
CASC3-208ENST00000583649 LEMD3Q9Y2U8 911 aa14.41□□□□□ -0.1
CASC3-208ENST00000583649 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
CASC3-208ENST00000583649 GTF2A2P52657 109 aa14.4□□□□□ -0.1
CASC3-208ENST00000583649 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
CASC3-208ENST00000583649 CCER1Q8TC90 406 aaPredicted RBP14.4□□□□□ -0.1
CASC3-208ENST00000583649 CLMNQ96JQ2 1002 aa14.4□□□□□ -0.1
CASC3-208ENST00000583649 CHMP4AQ9BY43 222 aa14.4□□□□□ -0.1
CASC3-208ENST00000583649 BSDC1Q9NW68 430 aaPredicted RBP14.4□□□□□ -0.1
CASC3-208ENST00000583649 CWC25Q9NXE8 425 aaPredicted RBP14.4□□□□□ -0.1
CASC3-208ENST00000583649 HOXD10P28358 340 aa14.39□□□□□ -0.11
CASC3-208ENST00000583649 KCNJ4P48050 445 aa14.39□□□□□ -0.11
CASC3-208ENST00000583649 CCT4P50991 539 aaKnown RBP14.39□□□□□ -0.11
CASC3-208ENST00000583649 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
CASC3-208ENST00000583649 MXD3Q9BW11 206 aa14.39□□□□□ -0.11
CASC3-208ENST00000583649 ANKRD2Q9GZV1 360 aa14.39□□□□□ -0.11
CASC3-208ENST00000583649 LAS1LQ9Y4W2 734 aaKnown RBP14.39□□□□□ -0.11
CASC3-208ENST00000583649 ZNF804BA4D1E1 1349 aa14.39□□□□□ -0.11
CASC3-208ENST00000583649 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
CASC3-208ENST00000583649 CAPN2P17655 700 aa14.38□□□□□ -0.11
CASC3-208ENST00000583649 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
CASC3-208ENST00000583649 MTMR14Q8NCE2 650 aa14.38□□□□□ -0.11
CASC3-208ENST00000583649 HELBQ8NG08 1087 aaPredicted RBP14.38□□□□□ -0.11
CASC3-208ENST00000583649 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
CASC3-208ENST00000583649 MINPP1Q9UNW1 487 aa14.38□□□□□ -0.11
CASC3-208ENST00000583649 CENPFP49454 3210 aa14.38□□□□□ -0.11
CASC3-208ENST00000583649 GTF2IP78347 998 aa14.37□□□□□ -0.11
CASC3-208ENST00000583649 SH3TC2Q8TF17 1288 aa14.37□□□□□ -0.11
CASC3-208ENST00000583649 VEZTQ9HBM0 779 aa14.37□□□□□ -0.11
CASC3-208ENST00000583649 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
CASC3-208ENST00000583649 CSADQ9Y600 493 aa14.37□□□□□ -0.11
CASC3-208ENST00000583649 HTTP42858 3142 aa14.37□□□□□ -0.11
CASC3-208ENST00000583649 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
CASC3-208ENST00000583649 CCL15Q16663 113 aa14.36□□□□□ -0.11
CASC3-208ENST00000583649 ZBED3Q96IU2 234 aaPredicted RBP14.36□□□□□ -0.11
CASC3-208ENST00000583649 MYD88Q99836 296 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms