RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 USP48Q86UV5 1035 aa31.37■■■□□ 2.61
TSEN54-209ENST00000583454 GREM2Q9H772 168 aa31.37■■■□□ 2.61
TSEN54-209ENST00000583454 C9orf78Q9NZ63 289 aaPredicted RBP31.37■■■□□ 2.61
TSEN54-209ENST00000583454 UTYO14607 1347 aa31.36■■■□□ 2.61
TSEN54-209ENST00000583454 GRM1Q13255 1194 aa31.36■■■□□ 2.61
TSEN54-209ENST00000583454 IPO8O15397 1037 aaKnown RBP31.35■■■□□ 2.61
TSEN54-209ENST00000583454 ZNF408Q9H9D4 720 aa31.35■■■□□ 2.61
TSEN54-209ENST00000583454 CSF1RP07333 972 aa31.34■■■□□ 2.61
TSEN54-209ENST00000583454 CDC5LQ99459 802 aaKnown RBP31.34■■■□□ 2.61
TSEN54-209ENST00000583454 MAP2K2P36507 400 aa31.33■■■□□ 2.61
TSEN54-209ENST00000583454 CCT4P50991 539 aaKnown RBP31.33■■■□□ 2.61
TSEN54-209ENST00000583454 BSDC1Q9NW68 430 aaPredicted RBP31.33■■■□□ 2.61
TSEN54-209ENST00000583454 MINPP1Q9UNW1 487 aa31.33■■■□□ 2.61
TSEN54-209ENST00000583454 ATP2B4P23634 1241 aa31.32■■■□□ 2.6
TSEN54-209ENST00000583454 FOXO4P98177 505 aa31.32■■■□□ 2.6
TSEN54-209ENST00000583454 KIF4BQ2VIQ3 1234 aa31.32■■■□□ 2.6
TSEN54-209ENST00000583454 RBM26Q5T8P6 1007 aaKnown RBP31.32■■■□□ 2.6
TSEN54-209ENST00000583454 GMLQ99445 158 aa31.32■■■□□ 2.6
TSEN54-209ENST00000583454 A0A1B0GUL6 1792 aa31.32■■■□□ 2.6
TSEN54-209ENST00000583454 ASTN2O75129 1339 aaPredicted RBP31.31■■■□□ 2.6
TSEN54-209ENST00000583454 NBPF7P0C2Y1 421 aaPredicted RBP31.31■■■□□ 2.6
TSEN54-209ENST00000583454 ZNF280AP59817 542 aaPredicted RBP31.31■■■□□ 2.6
TSEN54-209ENST00000583454 RSBN1LQ6PCB5 846 aaPredicted RBP31.31■■■□□ 2.6
TSEN54-209ENST00000583454 KRT26Q7Z3Y9 468 aa31.31■■■□□ 2.6
TSEN54-209ENST00000583454 USP44Q9H0E7 712 aa31.31■■■□□ 2.6
TSEN54-209ENST00000583454 MED23Q9ULK4 1368 aa31.3■■■□□ 2.6
TSEN54-209ENST00000583454 ADM5C9JUS6 153 aa31.3■■■□□ 2.6
TSEN54-209ENST00000583454 ATF7IPQ6VMQ6 1270 aa31.3■■■□□ 2.6
TSEN54-209ENST00000583454 TRIM27P14373 513 aa31.29■■■□□ 2.6
TSEN54-209ENST00000583454 AGBL3Q8NEM8 1001 aa31.29■■■□□ 2.6
TSEN54-209ENST00000583454 FRAT1Q92837 279 aaPredicted RBP31.29■■■□□ 2.6
TSEN54-209ENST00000583454 G3V3G9 751 aa31.28■■■□□ 2.6
TSEN54-209ENST00000583454 EPHA10Q5JZY3 1008 aa31.28■■■□□ 2.6
TSEN54-209ENST00000583454 DCAF8Q5TAQ9 597 aa31.28■■■□□ 2.6
TSEN54-209ENST00000583454 KAZALD1Q96I82 304 aa31.28■■■□□ 2.6
TSEN54-209ENST00000583454 ZKSCAN2Q63HK3 967 aa31.27■■■□□ 2.6
TSEN54-209ENST00000583454 INTS3Q68E01 1043 aaKnown RBP31.27■■■□□ 2.6
TSEN54-209ENST00000583454 PODNQ7Z5L7 613 aa31.27■■■□□ 2.6
TSEN54-209ENST00000583454 GGA3Q9NZ52 723 aa31.27■■■□□ 2.6
TSEN54-209ENST00000583454 DCPSQ96C86 337 aaKnown RBP31.26■■■□□ 2.59
TSEN54-209ENST00000583454 HUNKP57058 714 aa31.25■■■□□ 2.59
TSEN54-209ENST00000583454 FAM161AQ3B820 660 aa31.25■■■□□ 2.59
TSEN54-209ENST00000583454 SUCLG2Q96I99 432 aa31.25■■■□□ 2.59
TSEN54-209ENST00000583454 ZIC5Q96T25 663 aa31.25■■■□□ 2.59
TSEN54-209ENST00000583454 TNNQ9UQP3 1299 aa31.25■■■□□ 2.59
TSEN54-209ENST00000583454 USP17L3A6NCW0 530 aa31.24■■■□□ 2.59
TSEN54-209ENST00000583454 USP17L4A6NCW7 530 aa31.24■■■□□ 2.59
TSEN54-209ENST00000583454 LMBR1LQ6UX01 489 aa31.24■■■□□ 2.59
TSEN54-209ENST00000583454 USP17L1Q7RTZ2 530 aa31.24■■■□□ 2.59
TSEN54-209ENST00000583454 ITGA6P23229 1130 aa31.23■■■□□ 2.59
TSEN54-209ENST00000583454 TXNRD3Q86VQ6 643 aa31.23■■■□□ 2.59
TSEN54-209ENST00000583454 BEGAINQ9BUH8 593 aa31.23■■■□□ 2.59
TSEN54-209ENST00000583454 GBA2Q9HCG7 927 aaPredicted RBP31.23■■■□□ 2.59
TSEN54-209ENST00000583454 TSKSQ9UJT2 592 aa31.23■■■□□ 2.59
TSEN54-209ENST00000583454 YTHDC1Q96MU7 727 aaKnown RBP31.22■■■□□ 2.59
TSEN54-209ENST00000583454 CASP8AP2Q9UKL3 1982 aa31.22■■■□□ 2.59
TSEN54-209ENST00000583454 FAM155AB1AL88 458 aaPredicted RBP31.21■■■□□ 2.59
TSEN54-209ENST00000583454 USP17L8P0C7I0 530 aa31.21■■■□□ 2.59
TSEN54-209ENST00000583454 DACT2Q5SW24 774 aa31.21■■■□□ 2.59
TSEN54-209ENST00000583454 KLRK1P26718 216 aa31.2■■■□□ 2.59
TSEN54-209ENST00000583454 IGHMBP2P38935 993 aaKnown RBP31.2■■■□□ 2.59
TSEN54-209ENST00000583454 SCARF1Q14162 830 aa31.2■■■□□ 2.59
TSEN54-209ENST00000583454 RABL6Q3YEC7 729 aaPredicted RBP31.2■■■□□ 2.59
TSEN54-209ENST00000583454 ANGEL2Q5VTE6 544 aaKnown RBP31.2■■■□□ 2.59
TSEN54-209ENST00000583454 SULF1Q8IWU6 871 aa31.2■■■□□ 2.59
TSEN54-209ENST00000583454 MYOZ2Q9NPC6 264 aa31.2■■■□□ 2.59
TSEN54-209ENST00000583454 RCAN3Q9UKA8 241 aa31.2■■■□□ 2.59
TSEN54-209ENST00000583454 LEMD3Q9Y2U8 911 aa31.2■■■□□ 2.59
TSEN54-209ENST00000583454 ANKRD18BA2A2Z9 1011 aa31.19■■■□□ 2.58
TSEN54-209ENST00000583454 NOGQ13253 232 aa31.19■■■□□ 2.58
TSEN54-209ENST00000583454 CLUAP1Q96AJ1 413 aa31.19■■■□□ 2.58
TSEN54-209ENST00000583454 CDCA5Q96FF9 252 aa31.19■■■□□ 2.58
TSEN54-209ENST00000583454 MXD3Q9BW11 206 aa31.19■■■□□ 2.58
TSEN54-209ENST00000583454 BICC1Q9H694 974 aaKnown RBP31.19■■■□□ 2.58
TSEN54-209ENST00000583454 IFIT5Q13325 482 aaKnown RBP31.18■■■□□ 2.58
TSEN54-209ENST00000583454 ANKRD44Q8N8A2 993 aa31.18■■■□□ 2.58
TSEN54-209ENST00000583454 RGMBQ6NW40 437 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 C2orf69Q8N8R5 385 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 COA1Q9GZY4 146 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 CHMP3Q9Y3E7 222 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 ZNF804BA4D1E1 1349 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 IRS2Q9Y4H2 1338 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 PAPPA2Q9BXP8 1791 aa31.17■■■□□ 2.58
TSEN54-209ENST00000583454 CA12O43570 354 aa31.16■■■□□ 2.58
TSEN54-209ENST00000583454 PITPNM2Q9BZ72 1349 aa31.16■■■□□ 2.58
TSEN54-209ENST00000583454 UBTFL1P0CB47 393 aaPredicted RBP31.15■■■□□ 2.58
TSEN54-209ENST00000583454 CCDC57Q2TAC2 916 aa31.15■■■□□ 2.58
TSEN54-209ENST00000583454 STRIP1Q5VSL9 837 aa31.15■■■□□ 2.58
TSEN54-209ENST00000583454 ABHD8Q96I13 439 aa31.15■■■□□ 2.58
TSEN54-209ENST00000583454 ANKRD2Q9GZV1 360 aa31.15■■■□□ 2.58
TSEN54-209ENST00000583454 DZIP1LQ8IYY4 767 aaKnown RBP31.14■■■□□ 2.58
TSEN54-209ENST00000583454 TMEM57Q8N5G2 664 aa31.14■■■□□ 2.58
TSEN54-209ENST00000583454 MEIS3Q99687 375 aa31.14■■■□□ 2.58
TSEN54-209ENST00000583454 AKAP11Q9UKA4 1901 aa31.14■■■□□ 2.57
TSEN54-209ENST00000583454 CHRNDQ07001 517 aa31.13■■■□□ 2.57
TSEN54-209ENST00000583454 MPHOSPH8Q99549 860 aa31.13■■■□□ 2.57
TSEN54-209ENST00000583454 HDAC5Q9UQL6 1122 aa31.13■■■□□ 2.57
TSEN54-209ENST00000583454 NBPF9Q3BBW0 867 aa31.12■■■□□ 2.57
TSEN54-209ENST00000583454 SCAF8Q9UPN6 1271 aaKnown RBP31.12■■■□□ 2.57
TSEN54-209ENST00000583454 SNAP23O00161 211 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms