RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PTPN12Q05209 780 aaKnown RBP15.91■□□□□ 0.14
TOP3A-215ENST00000583328 PRKG1Q13976 671 aa15.91■□□□□ 0.14
TOP3A-215ENST00000583328 CDC5LQ99459 802 aaKnown RBP15.91■□□□□ 0.14
TOP3A-215ENST00000583328 DACT2Q5SW24 774 aa15.9■□□□□ 0.14
TOP3A-215ENST00000583328 R3HDMLQ9H3Y0 253 aa15.9■□□□□ 0.14
TOP3A-215ENST00000583328 MBIPQ9NS73 344 aa15.9■□□□□ 0.14
TOP3A-215ENST00000583328 WTIPA6NIX2 430 aaPredicted RBP15.89■□□□□ 0.13
TOP3A-215ENST00000583328 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
TOP3A-215ENST00000583328 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
TOP3A-215ENST00000583328 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
TOP3A-215ENST00000583328 CFHR5Q9BXR6 569 aa15.89■□□□□ 0.13
TOP3A-215ENST00000583328 MINPP1Q9UNW1 487 aa15.89■□□□□ 0.13
TOP3A-215ENST00000583328 MYO3BQ8WXR4 1341 aa15.89■□□□□ 0.13
TOP3A-215ENST00000583328 ALDH1A1P00352 501 aa15.88■□□□□ 0.13
TOP3A-215ENST00000583328 SPRYD7Q5W111 196 aa15.88■□□□□ 0.13
TOP3A-215ENST00000583328 METTL22Q9BUU2 404 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-215ENST00000583328 COA1Q9GZY4 146 aa15.88■□□□□ 0.13
TOP3A-215ENST00000583328 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-215ENST00000583328 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-215ENST00000583328 ANGEL1Q9UNK9 670 aaKnown RBP15.88■□□□□ 0.13
TOP3A-215ENST00000583328 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
TOP3A-215ENST00000583328 SASH1O94885 1247 aa15.87■□□□□ 0.13
TOP3A-215ENST00000583328 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
TOP3A-215ENST00000583328 MMP14P50281 582 aa15.87■□□□□ 0.13
TOP3A-215ENST00000583328 CCT4P50991 539 aaKnown RBP15.87■□□□□ 0.13
TOP3A-215ENST00000583328 CTSWP56202 376 aa15.87■□□□□ 0.13
TOP3A-215ENST00000583328 APOBEC3FQ8IUX4 373 aaKnown RBP15.87■□□□□ 0.13
TOP3A-215ENST00000583328 SLC10A4Q96EP9 437 aa15.87■□□□□ 0.13
TOP3A-215ENST00000583328 TRIM17Q9Y577 477 aa15.87■□□□□ 0.13
TOP3A-215ENST00000583328 INHBEP58166 350 aa15.86■□□□□ 0.13
TOP3A-215ENST00000583328 LDLRAD1Q5T700 205 aa15.86■□□□□ 0.13
TOP3A-215ENST00000583328 TTLL5Q6EMB2 1281 aa15.86■□□□□ 0.13
TOP3A-215ENST00000583328 MANSC4A6NHS7 340 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-215ENST00000583328 HABP4Q5JVS0 413 aaKnown RBP15.85■□□□□ 0.13
TOP3A-215ENST00000583328 INTS3Q68E01 1043 aaKnown RBP15.85■□□□□ 0.13
TOP3A-215ENST00000583328 KIAA0825Q8IV33 1275 aa15.85■□□□□ 0.13
TOP3A-215ENST00000583328 TTLL11Q8NHH1 800 aa15.85■□□□□ 0.13
TOP3A-215ENST00000583328 GREM2Q9H772 168 aa15.85■□□□□ 0.13
TOP3A-215ENST00000583328 LEMD3Q9Y2U8 911 aa15.85■□□□□ 0.13
TOP3A-215ENST00000583328 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 IGHMBP2P38935 993 aaKnown RBP15.84■□□□□ 0.13
TOP3A-215ENST00000583328 OTOP1Q7RTM1 612 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 IFNL1Q8IU54 200 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
TOP3A-215ENST00000583328 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
TOP3A-215ENST00000583328 GTF2IP78347 998 aa15.83■□□□□ 0.12
TOP3A-215ENST00000583328 CCDC30Q5VVM6 783 aa15.83■□□□□ 0.12
TOP3A-215ENST00000583328 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.12
TOP3A-215ENST00000583328 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
TOP3A-215ENST00000583328 MYBBP1AQ9BQG0 1328 aaKnown RBP15.83■□□□□ 0.12
TOP3A-215ENST00000583328 GNAI1P63096 354 aa15.82■□□□□ 0.12
TOP3A-215ENST00000583328 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
TOP3A-215ENST00000583328 ZNF804BA4D1E1 1349 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 PI4KAP2A4QPH2 592 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 PPP1R12BO60237 982 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-215ENST00000583328 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 KCNJ4P48050 445 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
TOP3A-215ENST00000583328 NEXNQ0ZGT2 675 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 DLGAP5Q15398 846 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 KSR2Q6VAB6 950 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 PI4KAP1Q8N8J0 262 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 C8orf58Q8NAV2 365 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 ERO1AQ96HE7 468 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 ZBED3Q96IU2 234 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-215ENST00000583328 ANKRD2Q9GZV1 360 aa15.81■□□□□ 0.12
TOP3A-215ENST00000583328 IGF2BP3O00425 579 aaKnown RBP eCLIP15.8■□□□□ 0.12
TOP3A-215ENST00000583328 ZBTB48P10074 688 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-215ENST00000583328 KLRK1P26718 216 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 OTUD7BQ6GQQ9 843 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 WNK4Q96J92 1243 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 MPHOSPH8Q99549 860 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 PTPN22Q9Y2R2 807 aa15.8■□□□□ 0.12
TOP3A-215ENST00000583328 SUPT20HL1Q3ZLR7 823 aa15.79■□□□□ 0.12
TOP3A-215ENST00000583328 CD99L2Q8TCZ2 262 aa15.79■□□□□ 0.12
TOP3A-215ENST00000583328 CD209Q9NNX6 404 aa15.79■□□□□ 0.12
TOP3A-215ENST00000583328 PSME4Q14997 1843 aa15.78■□□□□ 0.12
TOP3A-215ENST00000583328 APAF1O14727 1248 aa15.78■□□□□ 0.12
TOP3A-215ENST00000583328 EN2P19622 333 aaPredicted RBP15.78■□□□□ 0.12
TOP3A-215ENST00000583328 ITGA6P23229 1130 aa15.78■□□□□ 0.12
TOP3A-215ENST00000583328 CWF19L2Q2TBE0 894 aaKnown RBP15.78■□□□□ 0.12
TOP3A-215ENST00000583328 UBE3BQ7Z3V4 1068 aa15.78■□□□□ 0.12
TOP3A-215ENST00000583328 EFCC1Q9HA90 598 aa15.78■□□□□ 0.12
TOP3A-215ENST00000583328 PPP2R3BQ9Y5P8 575 aa15.78■□□□□ 0.12
TOP3A-215ENST00000583328 UNCXA6NJT0 531 aa15.77■□□□□ 0.12
TOP3A-215ENST00000583328 NEURL1BA8MQ27 555 aa15.77■□□□□ 0.12
TOP3A-215ENST00000583328 H7C1W4 665 aa15.77■□□□□ 0.12
TOP3A-215ENST00000583328 MYO1BO43795 1136 aa15.77■□□□□ 0.12
TOP3A-215ENST00000583328 IREB2P48200 963 aaKnown RBP15.77■□□□□ 0.12
TOP3A-215ENST00000583328 CLRN2A0PK11 232 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 F8W031 263 aaPredicted RBP15.76■□□□□ 0.11
TOP3A-215ENST00000583328 SP3Q02447 781 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 CRHR2Q13324 411 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 CFAP100Q494V2 611 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms