RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SPACA7Q96KW9 195 aa9.41□□□□□ -0.9
SMARCE1-219ENST00000583294 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
SMARCE1-219ENST00000583294 A0A1W2PP55 124 aa9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 KIF4AO95239 1232 aa9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 HOXD8P13378 290 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 EIF2AK2P19525 551 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 PEAR1Q5VY43 1037 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 TNFRSF25Q93038 417 aa9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 KIAA1522Q9P206 1035 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-219ENST00000583294 E9PSI1 815 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 GHRHP01286 108 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 GNA15P30679 374 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 DAB2P98082 770 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 PCSK7Q16549 785 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 CEP120Q8N960 986 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 OSMRQ99650 979 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 EHD4Q9H223 541 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
SMARCE1-219ENST00000583294 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 ELOA3DA6NLF2 546 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 ATP11AP98196 1134 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 ELOA3BQ3SY89 546 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 ELOA3Q8NG57 546 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 OSBPL7Q9BZF2 842 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 BCL11AQ9H165 835 aa9.38□□□□□ -0.91
SMARCE1-219ENST00000583294 ADARB2-AS1A8MUL3 147 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 PIK3R2O00459 728 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 NXPE4Q6UWF7 544 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 TRIM11Q96F44 468 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 HHIPQ96QV1 700 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 MDFIQ99750 246 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 BCO2Q9BYV7 579 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 RASSF4Q9H2L5 321 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 DZANK1Q9NVP4 752 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 VTI1BQ9UEU0 232 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 NAGPAQ9UK23 515 aa9.37□□□□□ -0.91
SMARCE1-219ENST00000583294 C1QTNF9BB2RNN3 333 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 SORBS3O60504 671 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 ALAS2P22557 587 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 GRM2Q14416 872 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 KIAA0319Q5VV43 1072 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 ELMSAN1Q6PJG2 1045 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 LIN7BQ9HAP6 207 aa9.36□□□□□ -0.91
SMARCE1-219ENST00000583294 ADAM23O75077 832 aa9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 EIF4BP23588 611 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 PLD4Q96BZ4 506 aa9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 FRMD6Q96NE9 622 aa9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 PLVAPQ9BX97 442 aa9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 PBX4Q9BYU1 374 aa9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 NOP53Q9NZM5 478 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 AK5Q9Y6K8 562 aa9.35□□□□□ -0.91
SMARCE1-219ENST00000583294 BAG6P46379 1132 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 MRPL58Q14197 206 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 TSNAXIP1Q2TAA8 658 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 PSAPL1Q6NUJ1 521 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 CD163Q86VB7 1156 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 C12orf49Q9H741 205 aa9.34□□□□□ -0.91
SMARCE1-219ENST00000583294 METTL12A8MUP2 240 aa9.33□□□□□ -0.92
SMARCE1-219ENST00000583294 NFKBIEO00221 500 aa9.33□□□□□ -0.92
SMARCE1-219ENST00000583294 PDE2AO00408 941 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-219ENST00000583294 TCF12Q99081 682 aa9.33□□□□□ -0.92
SMARCE1-219ENST00000583294 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
SMARCE1-219ENST00000583294 GIPC1O14908 333 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 CHRNA4P43681 627 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 FCGRTP55899 365 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 GLIS3Q8NEA6 775 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 ASAP3Q8TDY4 903 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 NXPE3Q969Y0 559 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 BACH2Q9BYV9 841 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 TRAK1Q9UPV9 953 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 STARD13Q9Y3M8 1113 aa9.32□□□□□ -0.92
SMARCE1-219ENST00000583294 RGS9O75916 674 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 SMNDC1O75940 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 FURINP09958 794 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 USP17L7P0C7H9 530 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 SPRED3Q2MJR0 410 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 CCNJLQ8IV13 435 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 TMEM102Q8N9M5 508 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 LACRTQ9GZZ8 138 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
SMARCE1-219ENST00000583294 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 M0R082 166 aa9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 ITGAEP38570 1179 aa9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 GRIA4P48058 902 aa9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 ZNF417Q8TAU3 575 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms