RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
CTC1-211ENST00000583254 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 CLMNQ96JQ2 1002 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 MXD3Q9BW11 206 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 ANKIB1Q9P2G1 1089 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 SSC5DA1L4H1 1573 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 LAMA3Q16787 3333 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 OTOFQ9HC10 1997 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 SOX1O00570 391 aaPredicted RBP9.27□□□□□ -0.93
CTC1-211ENST00000583254 ZBTB48P10074 688 aaPredicted RBP9.27□□□□□ -0.93
CTC1-211ENST00000583254 INHBEP58166 350 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 RPS8P62241 208 aaKnown RBP9.27□□□□□ -0.93
CTC1-211ENST00000583254 NBPF11Q86T75 865 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 DPF3Q92784 378 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 SLC10A4Q96EP9 437 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 PRO3102Q9H379 93 aa9.27□□□□□ -0.93
CTC1-211ENST00000583254 WTIPA6NIX2 430 aaPredicted RBP9.26□□□□□ -0.93
CTC1-211ENST00000583254 GJA5P36382 358 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 APOBEC3FQ8IUX4 373 aaKnown RBP9.26□□□□□ -0.93
CTC1-211ENST00000583254 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 SHISA4Q96DD7 197 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 SEC31BQ9NQW1 1179 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 COL1A1P02452 1464 aaPredicted RBP9.26□□□□□ -0.93
CTC1-211ENST00000583254 SPEF2Q9C093 1822 aa9.26□□□□□ -0.93
CTC1-211ENST00000583254 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 OTUD7BQ6GQQ9 843 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 PTPN18Q99952 460 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 ECM29Q5VYK3 1845 aa9.25□□□□□ -0.93
CTC1-211ENST00000583254 IRS4O14654 1257 aaPredicted RBP9.24□□□□□ -0.93
CTC1-211ENST00000583254 MAP3K11Q16584 847 aa9.24□□□□□ -0.93
CTC1-211ENST00000583254 PODNQ7Z5L7 613 aa9.24□□□□□ -0.93
CTC1-211ENST00000583254 ISCA1Q9BUE6 129 aa9.24□□□□□ -0.93
CTC1-211ENST00000583254 XDHP47989 1333 aa9.24□□□□□ -0.93
CTC1-211ENST00000583254 COL25A1Q9BXS0 654 aaPredicted RBP9.23□□□□□ -0.93
CTC1-211ENST00000583254 ARHGAP39Q9C0H5 1083 aa9.23□□□□□ -0.93
CTC1-211ENST00000583254 MYO3BQ8WXR4 1341 aa9.23□□□□□ -0.93
CTC1-211ENST00000583254 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
CTC1-211ENST00000583254 TESPA1A2RU30 521 aaPredicted RBP9.22□□□□□ -0.93
CTC1-211ENST00000583254 PPP1R12BO60237 982 aaPredicted RBP9.22□□□□□ -0.93
CTC1-211ENST00000583254 NEFMP07197 916 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 ATP2B4P23634 1241 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 ARHGEF6Q15052 776 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 MTFR1Q15390 333 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 TAF1CQ15572 869 aaPredicted RBP9.22□□□□□ -0.93
CTC1-211ENST00000583254 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 PLBD2Q8NHP8 589 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 ZBED3Q96IU2 234 aaPredicted RBP9.22□□□□□ -0.93
CTC1-211ENST00000583254 CCDC85AQ96PX6 553 aaPredicted RBP9.22□□□□□ -0.93
CTC1-211ENST00000583254 DEFB129Q9H1M3 183 aa9.22□□□□□ -0.93
CTC1-211ENST00000583254 A0A1W2PPC1 479 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
CTC1-211ENST00000583254 PPP2R1AP30153 589 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 IREB2P48200 963 aaKnown RBP9.21□□□□□ -0.94
CTC1-211ENST00000583254 KIAA0825Q8IV33 1275 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 HTATIP2Q9BUP3 242 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 ELP3Q9H9T3 547 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 CHPF2Q9P2E5 772 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 NR2E3Q9Y5X4 410 aa9.21□□□□□ -0.94
CTC1-211ENST00000583254 ECM2O94769 699 aaPredicted RBP9.2□□□□□ -0.94
CTC1-211ENST00000583254 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
CTC1-211ENST00000583254 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 CCDC152Q4G0S7 254 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 STRIP1Q5VSL9 837 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 Q7L0L9 218 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 UBE2Q1Q7Z7E8 422 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 ANKRD18AQ8IVF6 992 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 CNKSR2Q8WXI2 1034 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 BRI3BPQ8WY22 251 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 OPTNQ96CV9 577 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 MS4A4AQ96JQ5 239 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 PLEKHF1Q96S99 279 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 ZFYVE28Q9HCC9 887 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 PCDHAC2Q9Y5I4 1007 aa9.2□□□□□ -0.94
CTC1-211ENST00000583254 CCL15-CCL14A0A0B4J2E2 113 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 CLRN2A0PK11 232 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 UNCXA6NJT0 531 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 USP2O75604 605 aaPredicted RBP9.19□□□□□ -0.94
CTC1-211ENST00000583254 CCL15Q16663 113 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
CTC1-211ENST00000583254 ANKRD13AQ8IZ07 590 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 FAM43AQ8N2R8 423 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 DEFB123Q8N688 67 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 ZBTB38Q8NAP3 1195 aaPredicted RBP9.19□□□□□ -0.94
CTC1-211ENST00000583254 PPP2R3BQ9Y5P8 575 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 ALPK3Q96L96 1907 aa9.19□□□□□ -0.94
CTC1-211ENST00000583254 FARP2O94887 1054 aaPredicted RBP9.18□□□□□ -0.94
CTC1-211ENST00000583254 GJA8P48165 433 aa9.18□□□□□ -0.94
CTC1-211ENST00000583254 MMP14P50281 582 aa9.18□□□□□ -0.94
CTC1-211ENST00000583254 LACTBP83111 547 aaPredicted RBP9.18□□□□□ -0.94
CTC1-211ENST00000583254 AOX1Q06278 1338 aa9.18□□□□□ -0.94
CTC1-211ENST00000583254 KIF22Q14807 665 aa9.18□□□□□ -0.94
CTC1-211ENST00000583254 DLGAP5Q15398 846 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms