RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 XAGE3Q8WTP9 111 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 MYD88Q99836 296 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 DDX21Q9NR30 783 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 ZKSCAN1P17029 563 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 GIMAP6Q6P9H5 292 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 DDX58O95786 925 aaKnown RBP17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 MTMR6Q9Y217 621 aa17.98■□□□□ 0.47
TRAPPC8-210ENST00000582513 PPP1R12AO14974 1030 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 MCTP2Q6DN12 878 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 LEKR1Q6ZMV7 388 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 IRAK4Q9NWZ3 460 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 PDE6BP35913 854 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 RBM5P52756 815 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 STK3Q13188 491 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 CCDC183Q5T5S1 534 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 USP54Q70EL1 1684 aa17.97■□□□□ 0.47
TRAPPC8-210ENST00000582513 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 CCDC189A1A4V9 331 aa17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 ZNF589Q86UQ0 364 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 AK7Q96M32 723 aa17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 UBE2HP62256 183 aa17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 NAIF1Q69YI7 327 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 GIMAP7Q8NHV1 300 aa17.96■□□□□ 0.47
TRAPPC8-210ENST00000582513 SLC27A2O14975 620 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 CEP135Q66GS9 1140 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 CCDC34Q96HJ3 373 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 LMO7Q8WWI1 1683 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 MICALL1Q8N3F8 863 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
TRAPPC8-210ENST00000582513 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 CHD2O14647 1828 aaKnown RBP17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 TMEM87AQ8NBN3 555 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 CABLES1Q8TDN4 633 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 NEURL1BA8MQ27 555 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 MAP4K1Q92918 833 aa17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 LARP1BQ659C4 914 aaKnown RBP17.94■□□□□ 0.46
TRAPPC8-210ENST00000582513 CCDC186Q7Z3E2 898 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 PAXBP1Q9Y5B6 917 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 GCKRQ14397 625 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 ERCC6LQ2NKX8 1250 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 ERBB3P21860 1342 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 CAND2O75155 1236 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 ATP6V1DQ9Y5K8 247 aa17.93■□□□□ 0.46
TRAPPC8-210ENST00000582513 MAGEA9P43362 315 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 CHRNA2Q15822 529 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 CCDC129Q6ZRS4 1044 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 UBE3BQ7Z3V4 1068 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 TM6SF1Q9BZW5 370 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 SH2B1Q9NRF2 756 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 NBPF9Q3BBW0 867 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
TRAPPC8-210ENST00000582513 SYCP1Q15431 976 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 SLC52A2Q9HAB3 445 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 TMCO3Q6UWJ1 677 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 NBPF5PQ86XG9 351 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 SEC62Q99442 399 aaKnown RBP17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 NCAPD2Q15021 1401 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 EIF3CLB5ME19 914 aaKnown RBP17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 KDM4AO75164 1064 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 TFCP2Q12800 502 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 CAMK4Q16566 473 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 PPM1EQ8WY54 764 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 EIF3CQ99613 913 aaKnown RBP17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 PRDM16Q9HAZ2 1276 aa17.91■□□□□ 0.46
TRAPPC8-210ENST00000582513 NPHP3Q7Z494 1330 aa17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 TPM1P09493 284 aa17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 PNMA6AP0CW24 399 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 KCNB2Q92953 911 aa17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 DBNLQ9UJU6 430 aaKnown RBP17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 UTYO14607 1347 aa17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 OAS2P29728 719 aaKnown RBP17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
TRAPPC8-210ENST00000582513 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms