RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 KCNJ4P48050 445 aa12.89□□□□□ -0.35
PPP4R1-220ENST00000581835 HIRAP54198 1017 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-220ENST00000581835 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-220ENST00000581835 ATF7IPQ6VMQ6 1270 aa12.89□□□□□ -0.35
PPP4R1-220ENST00000581835 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-220ENST00000581835 PLIN1O60240 522 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 TRIM27P14373 513 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 RSBN1LQ6PCB5 846 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 C15orf52Q6ZUT6 534 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 PGAP2Q9UHJ9 254 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 ZNF609O15014 1411 aa12.88□□□□□ -0.35
PPP4R1-220ENST00000581835 TRPM7Q96QT4 1865 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 AGBL3Q8NEM8 1001 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 GMLQ99445 158 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 MEIS3Q99687 375 aa12.87□□□□□ -0.35
PPP4R1-220ENST00000581835 EGFRP00533 1210 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 RFX5P48382 616 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 MROH5Q6ZUA9 1318 aa12.86□□□□□ -0.35
PPP4R1-220ENST00000581835 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-220ENST00000581835 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-220ENST00000581835 TTLL5Q6EMB2 1281 aa12.85□□□□□ -0.35
PPP4R1-220ENST00000581835 KLRG1Q96E93 195 aa12.85□□□□□ -0.35
PPP4R1-220ENST00000581835 LRRFIP2Q9Y608 721 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-220ENST00000581835 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 GNAI3P08754 354 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 IL1R1P14778 569 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 GTF2IP78347 998 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■■□ 23.2
PPP4R1-220ENST00000581835 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 ZNF804AQ7Z570 1209 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 MXD3Q9BW11 206 aa12.84□□□□□ -0.35
PPP4R1-220ENST00000581835 EYA2O00167 538 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 TRAF5O00463 557 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 PDE8BO95263 885 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 KIF4BQ2VIQ3 1234 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 METTL24Q5JXM2 366 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 MYO3BQ8WXR4 1341 aa12.83□□□□□ -0.36
PPP4R1-220ENST00000581835 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
PPP4R1-220ENST00000581835 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
PPP4R1-220ENST00000581835 FAM84BQ96KN1 310 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-220ENST00000581835 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
PPP4R1-220ENST00000581835 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
PPP4R1-220ENST00000581835 CIAO1O76071 339 aa12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 GYG1P46976 350 aa12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 MTX1Q13505 466 aa12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 CST9Q5W186 159 aa12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 JMYQ8N9B5 988 aa12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 TDRD7Q8NHU6 1098 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-220ENST00000581835 SASH1O94885 1247 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 GNAI2P04899 355 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 RLBP1P12271 317 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 FGFR2P21802 821 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 MMP14P50281 582 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 FKBP1AP62942 108 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 SCARF1Q14162 830 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 KIAA0825Q8IV33 1275 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 FTSJ3Q8IY81 847 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 SIL1Q9H173 461 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 GGA3Q9NZ52 723 aa12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 MKRN1Q9UHC7 482 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 PA2G4Q9UQ80 394 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 ASTN2O75129 1339 aaPredicted RBP12.8□□□□□ -0.36
PPP4R1-220ENST00000581835 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
PPP4R1-220ENST00000581835 PUM3Q15397 648 aaKnown RBP12.79□□□□□ -0.36
PPP4R1-220ENST00000581835 KRT26Q7Z3Y9 468 aa12.79□□□□□ -0.36
PPP4R1-220ENST00000581835 JAG2Q9Y219 1238 aa12.79□□□□□ -0.36
PPP4R1-220ENST00000581835 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
PPP4R1-220ENST00000581835 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms