RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 MICALL2Q8IY33 904 aa15.6■□□□□ 0.09
SMARCD2-209ENST00000581832 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
SMARCD2-209ENST00000581832 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
SMARCD2-209ENST00000581832 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
SMARCD2-209ENST00000581832 FMR1Q06787 632 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMARCD2-209ENST00000581832 RSBN1LQ6PCB5 846 aaPredicted RBP15.59■□□□□ 0.09
SMARCD2-209ENST00000581832 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
SMARCD2-209ENST00000581832 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
SMARCD2-209ENST00000581832 TRPM7Q96QT4 1865 aa15.59■□□□□ 0.09
SMARCD2-209ENST00000581832 USP17L3A6NCW0 530 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 USP17L4A6NCW7 530 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 G3V3G9 751 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 H7C1D1 291 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 TRIM27P14373 513 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 DACT2Q5SW24 774 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 DCAF8Q5TAQ9 597 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 USP17L1Q7RTZ2 530 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 SAMD7Q7Z3H4 446 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 AGBL3Q8NEM8 1001 aa15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 ZC3H15Q8WU90 426 aaKnown RBP15.58■□□□□ 0.08
SMARCD2-209ENST00000581832 ZNF280AP59817 542 aaPredicted RBP15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 LRRC24Q50LG9 513 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 TAF7LQ5H9L4 462 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 KLHDC4Q8TBB5 520 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 CD209Q9NNX6 404 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 CNNM1Q9NRU3 951 aa15.57■□□□□ 0.08
SMARCD2-209ENST00000581832 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
SMARCD2-209ENST00000581832 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
SMARCD2-209ENST00000581832 MEIS3Q99687 375 aa15.56■□□□□ 0.08
SMARCD2-209ENST00000581832 MXD3Q9BW11 206 aa15.56■□□□□ 0.08
SMARCD2-209ENST00000581832 TMEM88BA6NKF7 163 aa15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 TRAF5O00463 557 aa15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 IL1R1P14778 569 aa15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 UBE4AQ14139 1066 aa15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 TBC1D10BQ4KMP7 808 aaPredicted RBP15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 CST9Q5W186 159 aa15.55■□□□□ 0.08
SMARCD2-209ENST00000581832 MROH5Q6ZUA9 1318 aa15.54■□□□□ 0.08
SMARCD2-209ENST00000581832 PLIN1O60240 522 aa15.54■□□□□ 0.08
SMARCD2-209ENST00000581832 KCNJ4P48050 445 aa15.54■□□□□ 0.08
SMARCD2-209ENST00000581832 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
SMARCD2-209ENST00000581832 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
SMARCD2-209ENST00000581832 USP17L8P0C7I0 530 aa15.53■□□□□ 0.08
SMARCD2-209ENST00000581832 ATG9AQ7Z3C6 839 aa15.53■□□□□ 0.08
SMARCD2-209ENST00000581832 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
SMARCD2-209ENST00000581832 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
SMARCD2-209ENST00000581832 GLIS2Q9BZE0 524 aaPredicted RBP15.53■□□□□ 0.08
SMARCD2-209ENST00000581832 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 PDE8BO95263 885 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 GTF2IP78347 998 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 RBM26Q5T8P6 1007 aaKnown RBP15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 DLK2Q6UY11 383 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 CDC37L1Q7L3B6 337 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 CERS5Q8N5B7 392 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 MYOZ2Q9NPC6 264 aa15.52■□□□□ 0.08
SMARCD2-209ENST00000581832 CNTNAP1P78357 1384 aa15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 MYO3BQ8WXR4 1341 aa15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 EYA2O00167 538 aa15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 FGFR2P21802 821 aa15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 ZNF804AQ7Z570 1209 aa15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 FBXO33Q7Z6M2 555 aa15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 TDRD7Q8NHU6 1098 aaKnown RBP15.51■□□□□ 0.07
SMARCD2-209ENST00000581832 RASSF10A6NK89 507 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 SASH1O94885 1247 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 GNAI3P08754 354 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 RLBP1P12271 317 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 GYG1P46976 350 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 MTX1Q13505 466 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 ZBED3Q96IU2 234 aaPredicted RBP15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
SMARCD2-209ENST00000581832 FAM205AQ6ZU69 1335 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 CIAO1O76071 339 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 MMP14P50281 582 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 SCARF1Q14162 830 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 USP48Q86UV5 1035 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 COPRSQ9NQ92 184 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
SMARCD2-209ENST00000581832 WNT10BO00744 389 aa15.48■□□□□ 0.07
SMARCD2-209ENST00000581832 NBPF9Q3BBW0 867 aa15.48■□□□□ 0.07
SMARCD2-209ENST00000581832 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
SMARCD2-209ENST00000581832 GGA3Q9NZ52 723 aa15.48■□□□□ 0.07
SMARCD2-209ENST00000581832 PA2G4Q9UQ80 394 aaKnown RBP15.48■□□□□ 0.07
SMARCD2-209ENST00000581832 CELF2O95319 508 aaKnown RBP15.47■□□□□ 0.07
SMARCD2-209ENST00000581832 VEGFBP49765 207 aa15.47■□□□□ 0.07
SMARCD2-209ENST00000581832 KRT26Q7Z3Y9 468 aa15.47■□□□□ 0.07
SMARCD2-209ENST00000581832 SAPCD2Q86UD0 394 aa15.47■□□□□ 0.07
SMARCD2-209ENST00000581832 KIAA0825Q8IV33 1275 aa15.47■□□□□ 0.07
SMARCD2-209ENST00000581832 TLL2Q9Y6L7 1015 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms