RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 JMYQ8N9B5 988 aa24.53■■□□□ 1.52
SREBF1-220ENST00000581707 AGBL3Q8NEM8 1001 aa24.53■■□□□ 1.52
SREBF1-220ENST00000581707 SNAP23O00161 211 aa24.52■■□□□ 1.52
SREBF1-220ENST00000581707 ANKRD44Q8N8A2 993 aa24.52■■□□□ 1.52
SREBF1-220ENST00000581707 A0A1B0GUL6 1792 aa24.52■■□□□ 1.52
SREBF1-220ENST00000581707 TRAF5O00463 557 aa24.51■■□□□ 1.51
SREBF1-220ENST00000581707 PLIN1O60240 522 aa24.51■■□□□ 1.51
SREBF1-220ENST00000581707 RBM26Q5T8P6 1007 aaKnown RBP24.51■■□□□ 1.51
SREBF1-220ENST00000581707 KIF16BQ96L93 1317 aa24.51■■□□□ 1.51
SREBF1-220ENST00000581707 ZNF609O15014 1411 aa24.51■■□□□ 1.51
SREBF1-220ENST00000581707 EGFRP00533 1210 aa24.5■■□□□ 1.51
SREBF1-220ENST00000581707 FMR1Q06787 632 aaKnown RBP eCLIP24.5■■□□□ 1.51
SREBF1-220ENST00000581707 ARHGAP45Q92619 1136 aa24.5■■□□□ 1.51
SREBF1-220ENST00000581707 GMLQ99445 158 aa24.5■■□□□ 1.51
SREBF1-220ENST00000581707 MKRN1Q9UHC7 482 aaKnown RBP24.5■■□□□ 1.51
SREBF1-220ENST00000581707 C15orf52Q6ZUT6 534 aaKnown RBP24.49■■□□□ 1.51
SREBF1-220ENST00000581707 FBXW7Q969H0 707 aa24.49■■□□□ 1.51
SREBF1-220ENST00000581707 PUS3Q9BZE2 481 aaKnown RBP24.49■■□□□ 1.51
SREBF1-220ENST00000581707 PCNTO95613 3336 aa24.49■■□□□ 1.51
SREBF1-220ENST00000581707 TRPM7Q96QT4 1865 aa24.49■■□□□ 1.51
SREBF1-220ENST00000581707 ZNF280AP59817 542 aaPredicted RBP24.48■■□□□ 1.51
SREBF1-220ENST00000581707 KIF4BQ2VIQ3 1234 aa24.48■■□□□ 1.51
SREBF1-220ENST00000581707 DACT2Q5SW24 774 aa24.48■■□□□ 1.51
SREBF1-220ENST00000581707 STRIP1Q5VSL9 837 aa24.48■■□□□ 1.51
SREBF1-220ENST00000581707 GLIS2Q9BZE0 524 aaPredicted RBP24.48■■□□□ 1.51
SREBF1-220ENST00000581707 IRS2Q9Y4H2 1338 aa24.47■■□□□ 1.51
SREBF1-220ENST00000581707 USP17L8P0C7I0 530 aa24.47■■□□□ 1.51
SREBF1-220ENST00000581707 TTLL5Q6EMB2 1281 aa24.47■■□□□ 1.51
SREBF1-220ENST00000581707 CDC37L1Q7L3B6 337 aa24.47■■□□□ 1.51
SREBF1-220ENST00000581707 CD209Q9NNX6 404 aa24.47■■□□□ 1.51
SREBF1-220ENST00000581707 RIPOR2Q9Y4F9 1068 aa24.47■■□□□ 1.51
SREBF1-220ENST00000581707 CNTNAP1P78357 1384 aa24.46■■□□□ 1.51
SREBF1-220ENST00000581707 POLR2AP24928 1970 aaKnown RBP24.46■■□□□ 1.51
SREBF1-220ENST00000581707 IPO8O15397 1037 aaKnown RBP24.46■■□□□ 1.51
SREBF1-220ENST00000581707 UBTFL1P0CB47 393 aaPredicted RBP24.46■■□□□ 1.51
SREBF1-220ENST00000581707 CST9Q5W186 159 aa24.46■■□□□ 1.51
SREBF1-220ENST00000581707 MXD3Q9BW11 206 aa24.46■■□□□ 1.51
SREBF1-220ENST00000581707 MROH5Q6ZUA9 1318 aa24.45■■□□□ 1.5
SREBF1-220ENST00000581707 BCAR3O75815 825 aa24.45■■□□□ 1.5
SREBF1-220ENST00000581707 ZNF804AQ7Z570 1209 aa24.45■■□□□ 1.5
SREBF1-220ENST00000581707 USP48Q86UV5 1035 aa24.45■■□□□ 1.5
SREBF1-220ENST00000581707 ABT1Q9ULW3 272 aaKnown RBP24.45■■□□□ 1.5
SREBF1-220ENST00000581707 ZNF646O15015 1829 aaPredicted RBP24.45■■□□□ 1.5
SREBF1-220ENST00000581707 MYO3BQ8WXR4 1341 aa24.44■■□□□ 1.5
SREBF1-220ENST00000581707 GTF2IP78347 998 aa24.44■■□□□ 1.5
SREBF1-220ENST00000581707 UBE4AQ14139 1066 aa24.44■■□□□ 1.5
SREBF1-220ENST00000581707 DCPSQ96C86 337 aaKnown RBP24.44■■□□□ 1.5
SREBF1-220ENST00000581707 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
SREBF1-220ENST00000581707 LRRC24Q50LG9 513 aa24.43■■□□□ 1.5
SREBF1-220ENST00000581707 INTS3Q68E01 1043 aaKnown RBP24.43■■□□□ 1.5
SREBF1-220ENST00000581707 OGFOD1Q8N543 542 aa24.43■■□□□ 1.5
SREBF1-220ENST00000581707 KLHDC4Q8TBB5 520 aa24.43■■□□□ 1.5
SREBF1-220ENST00000581707 FRAT1Q92837 279 aaPredicted RBP24.43■■□□□ 1.5
SREBF1-220ENST00000581707 MYOZ2Q9NPC6 264 aa24.43■■□□□ 1.5
SREBF1-220ENST00000581707 HDAC5Q9UQL6 1122 aa24.43■■□□□ 1.5
SREBF1-220ENST00000581707 RASSF10A6NK89 507 aa24.42■■□□□ 1.5
SREBF1-220ENST00000581707 CELF2O95319 508 aaKnown RBP24.42■■□□□ 1.5
SREBF1-220ENST00000581707 IL1R1P14778 569 aa24.42■■□□□ 1.5
SREBF1-220ENST00000581707 DEFB115Q30KQ5 88 aa24.42■■□□□ 1.5
SREBF1-220ENST00000581707 KRT26Q7Z3Y9 468 aa24.42■■□□□ 1.5
SREBF1-220ENST00000581707 VEGFBP49765 207 aa24.41■■□□□ 1.5
SREBF1-220ENST00000581707 SCARF1Q14162 830 aa24.41■■□□□ 1.5
SREBF1-220ENST00000581707 METTL24Q5JXM2 366 aa24.41■■□□□ 1.5
SREBF1-220ENST00000581707 ATF7IPQ6VMQ6 1270 aa24.41■■□□□ 1.5
SREBF1-220ENST00000581707 TRIM27P14373 513 aa24.4■■□□□ 1.5
SREBF1-220ENST00000581707 MEIS3Q99687 375 aa24.4■■□□□ 1.5
SREBF1-220ENST00000581707 ZNF408Q9H9D4 720 aa24.4■■□□□ 1.5
SREBF1-220ENST00000581707 GGA3Q9NZ52 723 aa24.4■■□□□ 1.5
SREBF1-220ENST00000581707 ASTN2O75129 1339 aaPredicted RBP24.39■■□□□ 1.5
SREBF1-220ENST00000581707 RFX5P48382 616 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-220ENST00000581707 MMP14P50281 582 aa24.39■■□□□ 1.49
SREBF1-220ENST00000581707 LRRFIP2Q9Y608 721 aaKnown RBP24.39■■□□□ 1.49
SREBF1-220ENST00000581707 DLK2Q6UY11 383 aa24.38■■□□□ 1.49
SREBF1-220ENST00000581707 KIAA0825Q8IV33 1275 aa24.38■■□□□ 1.49
SREBF1-220ENST00000581707 SULF1Q8IWU6 871 aa24.38■■□□□ 1.49
SREBF1-220ENST00000581707 HDAC9Q9UKV0 1011 aa24.38■■□□□ 1.49
SREBF1-220ENST00000581707 TLL2Q9Y6L7 1015 aa24.38■■□□□ 1.49
SREBF1-220ENST00000581707 ADM5C9JUS6 153 aa24.37■■□□□ 1.49
SREBF1-220ENST00000581707 PDE8BO95263 885 aa24.37■■□□□ 1.49
SREBF1-220ENST00000581707 GNAI3P08754 354 aa24.37■■□□□ 1.49
SREBF1-220ENST00000581707 HIBADHP31937 336 aaKnown RBP24.37■■□□□ 1.49
SREBF1-220ENST00000581707 GYG1P46976 350 aa24.37■■□□□ 1.49
SREBF1-220ENST00000581707 PTPN12Q05209 780 aaKnown RBP24.37■■□□□ 1.49
SREBF1-220ENST00000581707 ANGEL2Q5VTE6 544 aaKnown RBP24.37■■□□□ 1.49
SREBF1-220ENST00000581707 VGLL2Q8N8G2 317 aa24.37■■□□□ 1.49
SREBF1-220ENST00000581707 FAM84BQ96KN1 310 aaPredicted RBP24.37■■□□□ 1.49
SREBF1-220ENST00000581707 TNNQ9UQP3 1299 aa24.37■■□□□ 1.49
SREBF1-220ENST00000581707 EYA2O00167 538 aa24.36■■□□□ 1.49
SREBF1-220ENST00000581707 SASH1O94885 1247 aa24.36■■□□□ 1.49
SREBF1-220ENST00000581707 CLUAP1Q96AJ1 413 aa24.36■■□□□ 1.49
SREBF1-220ENST00000581707 NBPF9Q3BBW0 867 aa24.35■■□□□ 1.49
SREBF1-220ENST00000581707 ZKSCAN2Q63HK3 967 aa24.35■■□□□ 1.49
SREBF1-220ENST00000581707 SAPCD2Q86UD0 394 aa24.35■■□□□ 1.49
SREBF1-220ENST00000581707 CERS5Q8N5B7 392 aa24.35■■□□□ 1.49
SREBF1-220ENST00000581707 TDRD7Q8NHU6 1098 aaKnown RBP24.35■■□□□ 1.49
SREBF1-220ENST00000581707 PITPNM2Q9BZ72 1349 aa24.35■■□□□ 1.49
SREBF1-220ENST00000581707 FKBP1AP62942 108 aaKnown RBP24.34■■□□□ 1.49
SREBF1-220ENST00000581707 PAXIP1Q6ZW49 1069 aaPredicted RBP24.34■■□□□ 1.49
SREBF1-220ENST00000581707 VPS37DQ86XT2 251 aa24.34■■□□□ 1.49
SREBF1-220ENST00000581707 JAG2Q9Y219 1238 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms