RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 INHBEP58166 350 aa16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 TRIM28Q13263 835 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-218ENST00000581655 ZNF646O15015 1829 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-218ENST00000581655 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
CSNK1D-218ENST00000581655 DACT2Q5SW24 774 aa16.4■□□□□ 0.22
CSNK1D-218ENST00000581655 HDGFL1Q5TGJ6 251 aa16.4■□□□□ 0.22
CSNK1D-218ENST00000581655 ZBTB38Q8NAP3 1195 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-218ENST00000581655 FBXW7Q969H0 707 aa16.4■□□□□ 0.22
CSNK1D-218ENST00000581655 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 APOBEC3FQ8IUX4 373 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 SLC10A4Q96EP9 437 aa16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 EFCC1Q9HA90 598 aa16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-218ENST00000581655 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
CSNK1D-218ENST00000581655 WNK4Q96J92 1243 aa16.38■□□□□ 0.21
CSNK1D-218ENST00000581655 MYO3BQ8WXR4 1341 aa16.38■□□□□ 0.21
CSNK1D-218ENST00000581655 LAMB1P07942 1786 aa16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 CRHR2Q13324 411 aa16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 CLMNQ96JQ2 1002 aa16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 MED23Q9ULK4 1368 aa16.37■□□□□ 0.21
CSNK1D-218ENST00000581655 CHL1O00533 1208 aa16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 PDE8AO60658 829 aa16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 CAP1Q01518 475 aa16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-218ENST00000581655 H0YGN5 161 aa16.35■□□□□ 0.21
CSNK1D-218ENST00000581655 SP3Q02447 781 aa16.35■□□□□ 0.21
CSNK1D-218ENST00000581655 MAP3K11Q16584 847 aa16.35■□□□□ 0.21
CSNK1D-218ENST00000581655 RIC3Q7Z5B4 369 aa16.35■□□□□ 0.21
CSNK1D-218ENST00000581655 KIAA0825Q8IV33 1275 aa16.35■□□□□ 0.21
CSNK1D-218ENST00000581655 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
CSNK1D-218ENST00000581655 SPEF2Q9C093 1822 aa16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 PPP1R12BO60237 982 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 PCCAP05165 728 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 ZBED3Q96IU2 234 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 MYD88Q99836 296 aa16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 DEFB129Q9H1M3 183 aa16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 RANBP2P49792 3224 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 SSC5DA1L4H1 1573 aa16.34■□□□□ 0.21
CSNK1D-218ENST00000581655 DLL1O00548 723 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 HOXB7P09629 217 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 MMP14P50281 582 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 COA1Q9GZY4 146 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 MINPP1Q9UNW1 487 aa16.33■□□□□ 0.2
CSNK1D-218ENST00000581655 A0A0C4DFX4 3053 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 GJA5P36382 358 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 TTLL5Q6EMB2 1281 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 TXNRD3Q86VQ6 643 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 CCDC191Q8NCU4 936 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 PTPN18Q99952 460 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 PTCH2Q9Y6C5 1203 aa16.32■□□□□ 0.2
CSNK1D-218ENST00000581655 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-218ENST00000581655 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
CSNK1D-218ENST00000581655 CUL9Q8IWT3 2517 aa16.31■□□□□ 0.2
CSNK1D-218ENST00000581655 GTF2IP78347 998 aa16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 DLGAP5Q15398 846 aa16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 SLC17A8Q8NDX2 589 aa16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-218ENST00000581655 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
CSNK1D-218ENST00000581655 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-218ENST00000581655 UNCXA6NJT0 531 aa16.29■□□□□ 0.2
CSNK1D-218ENST00000581655 CTSWP56202 376 aa16.29■□□□□ 0.2
CSNK1D-218ENST00000581655 PPP2R3BQ9Y5P8 575 aa16.29■□□□□ 0.2
CSNK1D-218ENST00000581655 MYH3P11055 1940 aa16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 KLRK1P26718 216 aa16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 IREB2P48200 963 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 ARHGEF6Q15052 776 aa16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 SUPT20HL1Q3ZLR7 823 aa16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 PCDHAC2Q9Y5I4 1007 aa16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 COL6A3P12111 3177 aa16.28■□□□□ 0.2
CSNK1D-218ENST00000581655 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms