RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 PITPNM2Q9BZ72 1349 aa19.05■□□□□ 0.64
SCN4A-202ENST00000581514 ZNF646O15015 1829 aaPredicted RBP19.05■□□□□ 0.64
SCN4A-202ENST00000581514 RGS19P49795 217 aa19.05■□□□□ 0.64
SCN4A-202ENST00000581514 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
SCN4A-202ENST00000581514 PAPPA2Q9BXP8 1791 aa19.04■□□□□ 0.64
SCN4A-202ENST00000581514 H7C1W4 665 aa19.04■□□□□ 0.64
SCN4A-202ENST00000581514 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
SCN4A-202ENST00000581514 CCT4P50991 539 aaKnown RBP19.04■□□□□ 0.64
SCN4A-202ENST00000581514 UBE3BQ7Z3V4 1068 aa19.04■□□□□ 0.64
SCN4A-202ENST00000581514 FKBP1BP68106 108 aa19.03■□□□□ 0.64
SCN4A-202ENST00000581514 RNF186Q9NXI6 227 aa19.03■□□□□ 0.64
SCN4A-202ENST00000581514 CACNA1FO60840 1977 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 IL16Q14005 1332 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 MLLT1Q03111 559 aaPredicted RBP19.02■□□□□ 0.64
SCN4A-202ENST00000581514 DACT2Q5SW24 774 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 RASAL3Q86YV0 1011 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 CSRNP1Q96S65 589 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 PLA2G12BQ9BX93 195 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 COA1Q9GZY4 146 aa19.02■□□□□ 0.64
SCN4A-202ENST00000581514 TRPA1O75762 1119 aa19.01■□□□□ 0.63
SCN4A-202ENST00000581514 IGHMBP2P38935 993 aaKnown RBP19.01■□□□□ 0.63
SCN4A-202ENST00000581514 FLIIQ13045 1269 aa19.01■□□□□ 0.63
SCN4A-202ENST00000581514 GCKRQ14397 625 aa19.01■□□□□ 0.63
SCN4A-202ENST00000581514 TXNRD3Q86VQ6 643 aa19.01■□□□□ 0.63
SCN4A-202ENST00000581514 MXD3Q9BW11 206 aa19.01■□□□□ 0.63
SCN4A-202ENST00000581514 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
SCN4A-202ENST00000581514 LEMD3Q9Y2U8 911 aa19.01■□□□□ 0.63
SCN4A-202ENST00000581514 MYO3BQ8WXR4 1341 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 ITGA6P23229 1130 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 CASP7P55210 303 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 NBPF9Q3BBW0 867 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 STRIP1Q5VSL9 837 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 OGFOD1Q8N543 542 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 FBXW7Q969H0 707 aa19■□□□□ 0.63
SCN4A-202ENST00000581514 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
SCN4A-202ENST00000581514 MOB2Q70IA6 237 aa18.99■□□□□ 0.63
SCN4A-202ENST00000581514 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
SCN4A-202ENST00000581514 ANKRD2Q9GZV1 360 aa18.99■□□□□ 0.63
SCN4A-202ENST00000581514 ZNF804BA4D1E1 1349 aa18.99■□□□□ 0.63
SCN4A-202ENST00000581514 WNT10BO00744 389 aa18.98■□□□□ 0.63
SCN4A-202ENST00000581514 CSF1RP07333 972 aa18.98■□□□□ 0.63
SCN4A-202ENST00000581514 FKBP5Q13451 457 aaPredicted RBP18.98■□□□□ 0.63
SCN4A-202ENST00000581514 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
SCN4A-202ENST00000581514 DNAAF4Q8WXU2 420 aa18.98■□□□□ 0.63
SCN4A-202ENST00000581514 MPHOSPH8Q99549 860 aa18.98■□□□□ 0.63
SCN4A-202ENST00000581514 MYH16Q9H6N6 1097 aa18.98■□□□□ 0.63
SCN4A-202ENST00000581514 KLRK1P26718 216 aa18.97■□□□□ 0.63
SCN4A-202ENST00000581514 TTLL5Q6EMB2 1281 aa18.97■□□□□ 0.63
SCN4A-202ENST00000581514 LINS1Q8NG48 757 aa18.97■□□□□ 0.63
SCN4A-202ENST00000581514 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
SCN4A-202ENST00000581514 UBE2Q2LH0YL09 131 aa18.96■□□□□ 0.63
SCN4A-202ENST00000581514 MMP14P50281 582 aa18.96■□□□□ 0.63
SCN4A-202ENST00000581514 SASH1O94885 1247 aa18.95■□□□□ 0.62
SCN4A-202ENST00000581514 CHRNDQ07001 517 aa18.95■□□□□ 0.62
SCN4A-202ENST00000581514 VAMP4O75379 141 aa18.94■□□□□ 0.62
SCN4A-202ENST00000581514 KCNJ4P48050 445 aa18.94■□□□□ 0.62
SCN4A-202ENST00000581514 GTF2IP78347 998 aa18.94■□□□□ 0.62
SCN4A-202ENST00000581514 TTLL12Q14166 644 aaPredicted RBP18.94■□□□□ 0.62
SCN4A-202ENST00000581514 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
SCN4A-202ENST00000581514 HDAC9Q9UKV0 1011 aa18.94■□□□□ 0.62
SCN4A-202ENST00000581514 A0A1B0GUL6 1792 aa18.93■□□□□ 0.62
SCN4A-202ENST00000581514 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
SCN4A-202ENST00000581514 NF2P35240 595 aa18.93■□□□□ 0.62
SCN4A-202ENST00000581514 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
SCN4A-202ENST00000581514 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
SCN4A-202ENST00000581514 CTU1Q7Z7A3 348 aaKnown RBP18.92■□□□□ 0.62
SCN4A-202ENST00000581514 APOBEC3FQ8IUX4 373 aaKnown RBP18.92■□□□□ 0.62
SCN4A-202ENST00000581514 ZBED3Q96IU2 234 aaPredicted RBP18.92■□□□□ 0.62
SCN4A-202ENST00000581514 CD209Q9NNX6 404 aa18.92■□□□□ 0.62
SCN4A-202ENST00000581514 SALL2Q9Y467 1007 aaPredicted RBP18.92■□□□□ 0.62
SCN4A-202ENST00000581514 IRS2Q9Y4H2 1338 aa18.92■□□□□ 0.62
SCN4A-202ENST00000581514 SNAP23O00161 211 aa18.91■□□□□ 0.62
SCN4A-202ENST00000581514 FOXO4P98177 505 aa18.91■□□□□ 0.62
SCN4A-202ENST00000581514 EXOSC9Q06265 439 aaKnown RBP18.91■□□□□ 0.62
SCN4A-202ENST00000581514 TNRC18O15417 2968 aaPredicted RBP18.9■□□□□ 0.62
SCN4A-202ENST00000581514 F6X3S4 739 aa18.9■□□□□ 0.62
SCN4A-202ENST00000581514 TAF5LO75529 589 aa18.9■□□□□ 0.62
SCN4A-202ENST00000581514 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
SCN4A-202ENST00000581514 BEND3Q5T5X7 828 aa18.9■□□□□ 0.62
SCN4A-202ENST00000581514 C15orf52Q6ZUT6 534 aaKnown RBP18.9■□□□□ 0.62
SCN4A-202ENST00000581514 ARMC9Q7Z3E5 817 aa18.9■□□□□ 0.62
SCN4A-202ENST00000581514 HELBQ8NG08 1087 aaPredicted RBP18.9■□□□□ 0.62
SCN4A-202ENST00000581514 ECM29Q5VYK3 1845 aa18.89■□□□□ 0.61
SCN4A-202ENST00000581514 TM4SF4P48230 202 aa18.89■□□□□ 0.61
SCN4A-202ENST00000581514 PTPN12Q05209 780 aaKnown RBP18.89■□□□□ 0.61
SCN4A-202ENST00000581514 CERS5Q8N5B7 392 aa18.89■□□□□ 0.61
SCN4A-202ENST00000581514 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.61
SCN4A-202ENST00000581514 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
SCN4A-202ENST00000581514 MKRN3Q13064 507 aaKnown RBP18.88■□□□□ 0.61
SCN4A-202ENST00000581514 PRKG1Q13976 671 aa18.88■□□□□ 0.61
SCN4A-202ENST00000581514 DLGAP5Q15398 846 aa18.88■□□□□ 0.61
SCN4A-202ENST00000581514 COL1A1P02452 1464 aaPredicted RBP18.88■□□□□ 0.61
SCN4A-202ENST00000581514 SOX10P56693 466 aa18.87■□□□□ 0.61
SCN4A-202ENST00000581514 LDLRAD1Q5T700 205 aa18.87■□□□□ 0.61
SCN4A-202ENST00000581514 LMBR1LQ6UX01 489 aa18.87■□□□□ 0.61
SCN4A-202ENST00000581514 ZNF804AQ7Z570 1209 aa18.87■□□□□ 0.61
SCN4A-202ENST00000581514 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
SCN4A-202ENST00000581514 ZNF296Q8WUU4 475 aaPredicted RBP18.87■□□□□ 0.61
SCN4A-202ENST00000581514 SLC34A2O95436 690 aa18.86■□□□□ 0.61
SCN4A-202ENST00000581514 IL1R1P14778 569 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms