RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 ILDR2Q71H61 639 aa8.83□□□□□ -1
DDX42-213ENST00000581477 NBPF5PQ86XG9 351 aaPredicted RBP8.83□□□□□ -1
DDX42-213ENST00000581477 NBPF3Q9H094 633 aa8.83□□□□□ -1
DDX42-213ENST00000581477 COPRSQ9NQ92 184 aa8.83□□□□□ -1
DDX42-213ENST00000581477 RTL9Q8NET4 1388 aa8.83□□□□□ -1
DDX42-213ENST00000581477 SERPINB2P05120 415 aa8.82□□□□□ -1
DDX42-213ENST00000581477 CTSWP56202 376 aa8.82□□□□□ -1
DDX42-213ENST00000581477 DDR1Q08345 913 aa8.82□□□□□ -1
DDX42-213ENST00000581477 SF3B3Q15393 1217 aaKnown RBP8.82□□□□□ -1
DDX42-213ENST00000581477 NYAP1Q6ZVC0 841 aa8.82□□□□□ -1
DDX42-213ENST00000581477 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
DDX42-213ENST00000581477 PLPP6Q8IY26 295 aa8.82□□□□□ -1
DDX42-213ENST00000581477 BBXQ8WY36 941 aaPredicted RBP8.82□□□□□ -1
DDX42-213ENST00000581477 FAM177BA6PVY3 158 aa8.81□□□□□ -1
DDX42-213ENST00000581477 RAB11FIP3O75154 756 aa8.81□□□□□ -1
DDX42-213ENST00000581477 HCLS1P14317 486 aaPredicted RBP8.81□□□□□ -1
DDX42-213ENST00000581477 NUCB1Q02818 461 aa8.81□□□□□ -1
DDX42-213ENST00000581477 PTPN12Q05209 780 aaKnown RBP8.81□□□□□ -1
DDX42-213ENST00000581477 DSG2Q14126 1118 aa8.81□□□□□ -1
DDX42-213ENST00000581477 HSP90AB4PQ58FF6 505 aa8.81□□□□□ -1
DDX42-213ENST00000581477 PRR5LQ6MZQ0 368 aa8.81□□□□□ -1
DDX42-213ENST00000581477 CNBD1Q8NA66 436 aa8.81□□□□□ -1
DDX42-213ENST00000581477 KLRG2A4D1S0 409 aaPredicted RBP8.8□□□□□ -1
DDX42-213ENST00000581477 SURF6O75683 361 aaKnown RBP8.8□□□□□ -1
DDX42-213ENST00000581477 PDE4AP27815 886 aa8.8□□□□□ -1
DDX42-213ENST00000581477 GTF2E1P29083 439 aaPredicted RBP8.8□□□□□ -1
DDX42-213ENST00000581477 IFIT5Q13325 482 aaKnown RBP8.8□□□□□ -1
DDX42-213ENST00000581477 CCDC57Q2TAC2 916 aa8.8□□□□□ -1
DDX42-213ENST00000581477 CCDC152Q4G0S7 254 aa8.8□□□□□ -1
DDX42-213ENST00000581477 NLRP3Q96P20 1036 aa8.8□□□□□ -1
DDX42-213ENST00000581477 PDGFDQ9GZP0 370 aaPredicted RBP8.8□□□□□ -1
DDX42-213ENST00000581477 RTN4Q9NQC3 1192 aaKnown RBP8.8□□□□□ -1
DDX42-213ENST00000581477 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
DDX42-213ENST00000581477 ABCC12Q96J65 1359 aa8.8□□□□□ -1
DDX42-213ENST00000581477 CASZ1Q86V15 1759 aa8.8□□□□□ -1
DDX42-213ENST00000581477 ANKRD18BA2A2Z9 1011 aa8.79□□□□□ -1
DDX42-213ENST00000581477 CIAO1O76071 339 aa8.79□□□□□ -1
DDX42-213ENST00000581477 MMP10P09238 476 aa8.79□□□□□ -1
DDX42-213ENST00000581477 ITGA6P23229 1130 aa8.79□□□□□ -1
DDX42-213ENST00000581477 MFSD10Q14728 455 aa8.79□□□□□ -1
DDX42-213ENST00000581477 FAM161AQ3B820 660 aa8.79□□□□□ -1
DDX42-213ENST00000581477 CRY2Q49AN0 593 aa8.79□□□□□ -1
DDX42-213ENST00000581477 ANKRD45Q5TZF3 282 aa8.79□□□□□ -1
DDX42-213ENST00000581477 CHD1LQ86WJ1 897 aa8.79□□□□□ -1
DDX42-213ENST00000581477 ERC1Q8IUD2 1116 aa8.79□□□□□ -1
DDX42-213ENST00000581477 GREM2Q9H772 168 aa8.79□□□□□ -1
DDX42-213ENST00000581477 PA2G4Q9UQ80 394 aaKnown RBP8.79□□□□□ -1
DDX42-213ENST00000581477 EXOC6BQ9Y2D4 811 aa8.79□□□□□ -1
DDX42-213ENST00000581477 PARP3Q9Y6F1 533 aa8.79□□□□□ -1
DDX42-213ENST00000581477 EYA2O00167 538 aa8.78□□□□□ -1
DDX42-213ENST00000581477 SASH1O94885 1247 aa8.78□□□□□ -1
DDX42-213ENST00000581477 ST5P78524 1137 aa8.78□□□□□ -1
DDX42-213ENST00000581477 G3BP1Q13283 466 aaKnown RBP eCLIP8.78□□□□□ -1
DDX42-213ENST00000581477 ATG9AQ7Z3C6 839 aa8.78□□□□□ -1
DDX42-213ENST00000581477 KLHDC4Q8TBB5 520 aa8.78□□□□□ -1
DDX42-213ENST00000581477 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
DDX42-213ENST00000581477 KIF1BPQ96EK5 621 aa8.78□□□□□ -1
DDX42-213ENST00000581477 BRIP1Q9BX63 1249 aa8.78□□□□□ -1
DDX42-213ENST00000581477 LRRCC1Q9C099 1032 aa8.78□□□□□ -1
DDX42-213ENST00000581477 CHMP3Q9Y3E7 222 aa8.78□□□□□ -1
DDX42-213ENST00000581477 LRP5O75197 1615 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 ANKRD31Q8N7Z5 1873 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 NPHP1O15259 732 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 TBC1D12O60347 775 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 HOXA10P31260 410 aaPredicted RBP8.77□□□□□ -1.01
DDX42-213ENST00000581477 IL15P40933 162 aaPredicted RBP8.77□□□□□ -1.01
DDX42-213ENST00000581477 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 MSL1Q68DK7 614 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 ANKK1Q8NFD2 765 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 OXER1Q8TDS5 423 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
DDX42-213ENST00000581477 SEC31BQ9NQW1 1179 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 RIPOR2Q9Y4F9 1068 aa8.77□□□□□ -1.01
DDX42-213ENST00000581477 TNRC6CQ9HCJ0 1690 aaKnown RBP8.77□□□□□ -1.01
DDX42-213ENST00000581477 PDE6BP35913 854 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 R3HDM1Q15032 1099 aaKnown RBP8.76□□□□□ -1.01
DDX42-213ENST00000581477 LRRC24Q50LG9 513 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 LDHAL6AQ6ZMR3 332 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 CCDC24Q8N4L8 307 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
DDX42-213ENST00000581477 CRAMP1Q96RY5 1269 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
DDX42-213ENST00000581477 PUS3Q9BZE2 481 aaKnown RBP8.76□□□□□ -1.01
DDX42-213ENST00000581477 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 GPR108Q9NPR9 543 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 BSDC1Q9NW68 430 aaPredicted RBP8.76□□□□□ -1.01
DDX42-213ENST00000581477 STK17AQ9UEE5 414 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 SALL3Q9BXA9 1300 aa8.76□□□□□ -1.01
DDX42-213ENST00000581477 SMARCA5O60264 1052 aaPredicted RBP8.75□□□□□ -1.01
DDX42-213ENST00000581477 RPS8P62241 208 aaKnown RBP8.75□□□□□ -1.01
DDX42-213ENST00000581477 OS9Q13438 667 aaPredicted RBP8.75□□□□□ -1.01
DDX42-213ENST00000581477 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 DDX46Q7L014 1031 aaKnown RBP8.75□□□□□ -1.01
DDX42-213ENST00000581477 ANKRD18AQ8IVF6 992 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 SIL1Q9H173 461 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 OSBPL3Q9H4L5 887 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms