RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
PPP4R1-217ENST00000580583 SH2B1Q9NRF2 756 aaPredicted RBP7.55□□□□□ -1.2
PPP4R1-217ENST00000580583 NARFQ9UHQ1 456 aa7.55□□□□□ -1.2
PPP4R1-217ENST00000580583 LIMCH1Q9UPQ0 1083 aa7.55□□□□□ -1.2
PPP4R1-217ENST00000580583 LAMA4Q16363 1823 aa7.55□□□□□ -1.2
PPP4R1-217ENST00000580583 RPS6KA4O75676 772 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 BAG4O95429 457 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 CPA1P15085 419 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 FGFR2P21802 821 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 RPS6KB1P23443 525 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 ZAP70P43403 619 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 FKBP4Q02790 459 aaKnown RBP eCLIP7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 SCARF1Q14162 830 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 ANKRD1Q15327 319 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 TTF1Q15361 905 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 ZSCAN25Q6NSZ9 544 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 SEPT12Q8IYM1 358 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 LPIN2Q92539 896 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 APPBP2Q92624 585 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 ZSCAN31Q96LW9 406 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 CDC5LQ99459 802 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 MPHOSPH8Q99549 860 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.54□□□□□ -1.21e-7■■□□□ 12.7
PPP4R1-217ENST00000580583 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 AKAP11Q9UKA4 1901 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 MAST2Q6P0Q8 1798 aa7.54□□□□□ -1.2
PPP4R1-217ENST00000580583 TIAM2Q8IVF5 1701 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 M0R2C6 588 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 TRAK2O60296 914 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 ONECUT3O60422 494 aaPredicted RBP7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 CHGBP05060 677 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 MCAMP43121 646 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 KCNQ4P56696 695 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 PKP1Q13835 747 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 ERFEQ4G0M1 354 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 CCDC102BQ68D86 513 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 SEC62Q99442 399 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 ALDH8A1Q9H2A2 487 aaPredicted RBP7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 BCL2L12Q9HB09 334 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 SEC31BQ9NQW1 1179 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 RTCBQ9Y3I0 505 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 TAF6LQ9Y6J9 622 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 CARMIL3Q8ND23 1372 aa7.53□□□□□ -1.2
PPP4R1-217ENST00000580583 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.2
PPP4R1-217ENST00000580583 UBR3Q6ZT12 1888 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 ZPR1O75312 459 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 LARGE1O95461 756 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 BRD1O95696 1058 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 CYP21A2P08686 494 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 HMGB1P09429 215 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 PHKA1P46020 1223 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 SF3B3Q15393 1217 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 SKOR2Q2VWA4 1001 aaPredicted RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 FAM182BQ5T319 152 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 TBC1D9BQ66K14 1250 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 NBPF5PQ86XG9 351 aaPredicted RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 ANKRD18AQ8IVF6 992 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 BCL11BQ9C0K0 894 aaPredicted RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 PIH1D3Q9NQM4 214 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 SRP68Q9UHB9 627 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 SMC3Q9UQE7 1217 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 ZDHHC9Q9Y397 364 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 BRWD3Q6RI45 1802 aa7.52□□□□□ -1.21
PPP4R1-217ENST00000580583 DUOX1Q9NRD9 1551 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 HSPD1P10809 573 aaKnown RBP7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 ADD2P35612 726 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 CHRNDQ07001 517 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 RASGRF1Q13972 1273 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 UBE3CQ15386 1083 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 SLFNL1Q499Z3 407 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 SLC10A5Q5PT55 438 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 BICDL1Q6ZP65 573 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 C3orf67Q6ZVT6 689 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 CCDC83Q8IWF9 413 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 SPATA5Q8NB90 893 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 OSBP2Q969R2 916 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 NEK1Q96PY6 1258 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 CTNNA3Q9UI47 895 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 ZNF804BA4D1E1 1349 aa7.51□□□□□ -1.21
PPP4R1-217ENST00000580583 COL1A1P02452 1464 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 HAX1O00165 279 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 GPAA1O43292 621 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 IDH1O75874 414 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 PHF14O94880 888 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 PDE6AP16499 860 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 ST3GAL1Q11201 340 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 TOB2Q14106 344 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 ME3Q16798 604 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 SLC27A3Q5K4L6 730 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 MCTP1Q6DN14 999 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 STOX1Q6ZVD7 989 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 TCEANC2Q96MN5 208 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 TPCN1Q9ULQ1 816 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms