RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 COA1Q9GZY4 146 aa20.89■□□□□ 0.93
SREBF1-219ENST00000580540 KIF16BQ96L93 1317 aa20.88■□□□□ 0.93
SREBF1-219ENST00000580540 TMEM88BA6NKF7 163 aa20.88■□□□□ 0.93
SREBF1-219ENST00000580540 BCAR3O75815 825 aa20.88■□□□□ 0.93
SREBF1-219ENST00000580540 FMR1Q06787 632 aaKnown RBP eCLIP20.88■□□□□ 0.93
SREBF1-219ENST00000580540 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
SREBF1-219ENST00000580540 TRAF5O00463 557 aa20.87■□□□□ 0.93
SREBF1-219ENST00000580540 UBTFL1P0CB47 393 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-219ENST00000580540 RABL6Q3YEC7 729 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-219ENST00000580540 AGBL3Q8NEM8 1001 aa20.87■□□□□ 0.93
SREBF1-219ENST00000580540 MKRN1Q9UHC7 482 aaKnown RBP20.87■□□□□ 0.93
SREBF1-219ENST00000580540 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
SREBF1-219ENST00000580540 EGFRP00533 1210 aa20.86■□□□□ 0.93
SREBF1-219ENST00000580540 MXD3Q9BW11 206 aa20.86■□□□□ 0.93
SREBF1-219ENST00000580540 GLIS2Q9BZE0 524 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-219ENST00000580540 KLHDC4Q8TBB5 520 aa20.85■□□□□ 0.93
SREBF1-219ENST00000580540 ZC3H15Q8WU90 426 aaKnown RBP20.85■□□□□ 0.93
SREBF1-219ENST00000580540 ARHGAP45Q92619 1136 aa20.85■□□□□ 0.93
SREBF1-219ENST00000580540 USP17L8P0C7I0 530 aa20.84■□□□□ 0.93
SREBF1-219ENST00000580540 KIF4BQ2VIQ3 1234 aa20.84■□□□□ 0.93
SREBF1-219ENST00000580540 TTLL5Q6EMB2 1281 aa20.84■□□□□ 0.93
SREBF1-219ENST00000580540 CD209Q9NNX6 404 aa20.84■□□□□ 0.93
SREBF1-219ENST00000580540 PGAP2Q9UHJ9 254 aa20.84■□□□□ 0.93
SREBF1-219ENST00000580540 ABT1Q9ULW3 272 aaKnown RBP20.84■□□□□ 0.93
SREBF1-219ENST00000580540 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 GTF2IP78347 998 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 LRRC24Q50LG9 513 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 METTL24Q5JXM2 366 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 DACT2Q5SW24 774 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 STRIP1Q5VSL9 837 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 ZNF804AQ7Z570 1209 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 USP48Q86UV5 1035 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 RIPOR2Q9Y4F9 1068 aa20.83■□□□□ 0.93
SREBF1-219ENST00000580540 CDC37L1Q7L3B6 337 aa20.82■□□□□ 0.92
SREBF1-219ENST00000580540 CLUAP1Q96AJ1 413 aa20.82■□□□□ 0.92
SREBF1-219ENST00000580540 DCPSQ96C86 337 aaKnown RBP20.82■□□□□ 0.92
SREBF1-219ENST00000580540 GMLQ99445 158 aa20.82■□□□□ 0.92
SREBF1-219ENST00000580540 ZNF408Q9H9D4 720 aa20.82■□□□□ 0.92
SREBF1-219ENST00000580540 TNNQ9UQP3 1299 aa20.82■□□□□ 0.92
SREBF1-219ENST00000580540 MROH5Q6ZUA9 1318 aa20.81■□□□□ 0.92
SREBF1-219ENST00000580540 TRIM27P14373 513 aa20.81■□□□□ 0.92
SREBF1-219ENST00000580540 ZNF280AP59817 542 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-219ENST00000580540 UBE4AQ14139 1066 aa20.81■□□□□ 0.92
SREBF1-219ENST00000580540 ATF7IPQ6VMQ6 1270 aa20.81■□□□□ 0.92
SREBF1-219ENST00000580540 C15orf52Q6ZUT6 534 aaKnown RBP20.81■□□□□ 0.92
SREBF1-219ENST00000580540 MEIS3Q99687 375 aa20.81■□□□□ 0.92
SREBF1-219ENST00000580540 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
SREBF1-219ENST00000580540 LRRFIP2Q9Y608 721 aaKnown RBP20.81■□□□□ 0.92
SREBF1-219ENST00000580540 CELF2O95319 508 aaKnown RBP20.8■□□□□ 0.92
SREBF1-219ENST00000580540 SCARF1Q14162 830 aa20.8■□□□□ 0.92
SREBF1-219ENST00000580540 INTS3Q68E01 1043 aaKnown RBP20.8■□□□□ 0.92
SREBF1-219ENST00000580540 KRT26Q7Z3Y9 468 aa20.8■□□□□ 0.92
SREBF1-219ENST00000580540 OGFOD1Q8N543 542 aa20.8■□□□□ 0.92
SREBF1-219ENST00000580540 JMYQ8N9B5 988 aa20.8■□□□□ 0.92
SREBF1-219ENST00000580540 MYOZ2Q9NPC6 264 aa20.8■□□□□ 0.92
SREBF1-219ENST00000580540 MYO3BQ8WXR4 1341 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 IRS2Q9Y4H2 1338 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 PSME4Q14997 1843 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 CST9Q5W186 159 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 ZKSCAN2Q63HK3 967 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 DLK2Q6UY11 383 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 JAG2Q9Y219 1238 aa20.79■□□□□ 0.92
SREBF1-219ENST00000580540 ASTN2O75129 1339 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-219ENST00000580540 A0A1B0GUL6 1792 aa20.78■□□□□ 0.92
SREBF1-219ENST00000580540 CNTNAP1P78357 1384 aa20.78■□□□□ 0.92
SREBF1-219ENST00000580540 GYG1P46976 350 aa20.78■□□□□ 0.92
SREBF1-219ENST00000580540 DEFB115Q30KQ5 88 aa20.78■□□□□ 0.92
SREBF1-219ENST00000580540 PAXIP1Q6ZW49 1069 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-219ENST00000580540 KIAA0825Q8IV33 1275 aa20.78■□□□□ 0.92
SREBF1-219ENST00000580540 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
SREBF1-219ENST00000580540 ADM5C9JUS6 153 aa20.77■□□□□ 0.92
SREBF1-219ENST00000580540 GNAI3P08754 354 aa20.77■□□□□ 0.92
SREBF1-219ENST00000580540 IL1R1P14778 569 aa20.77■□□□□ 0.92
SREBF1-219ENST00000580540 HIBADHP31937 336 aaKnown RBP20.77■□□□□ 0.92
SREBF1-219ENST00000580540 RFX5P48382 616 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-219ENST00000580540 SIL1Q9H173 461 aa20.77■□□□□ 0.92
SREBF1-219ENST00000580540 HDAC9Q9UKV0 1011 aa20.77■□□□□ 0.92
SREBF1-219ENST00000580540 ZNF609O15014 1411 aa20.77■□□□□ 0.91
SREBF1-219ENST00000580540 EYA2O00167 538 aa20.76■□□□□ 0.91
SREBF1-219ENST00000580540 VEGFBP49765 207 aa20.76■□□□□ 0.91
SREBF1-219ENST00000580540 PTPN12Q05209 780 aaKnown RBP20.76■□□□□ 0.91
SREBF1-219ENST00000580540 GRM1Q13255 1194 aa20.76■□□□□ 0.91
SREBF1-219ENST00000580540 ANGEL2Q5VTE6 544 aaKnown RBP20.76■□□□□ 0.91
SREBF1-219ENST00000580540 VPS37DQ86XT2 251 aa20.76■□□□□ 0.91
SREBF1-219ENST00000580540 SULF1Q8IWU6 871 aa20.76■□□□□ 0.91
SREBF1-219ENST00000580540 POLR2AP24928 1970 aaKnown RBP20.76■□□□□ 0.91
SREBF1-219ENST00000580540 F8W031 263 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-219ENST00000580540 PDE8BO95263 885 aa20.75■□□□□ 0.91
SREBF1-219ENST00000580540 FAM84BQ96KN1 310 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-219ENST00000580540 TRPM7Q96QT4 1865 aa20.75■□□□□ 0.91
SREBF1-219ENST00000580540 RASSF10A6NK89 507 aa20.74■□□□□ 0.91
SREBF1-219ENST00000580540 NBPF9Q3BBW0 867 aa20.74■□□□□ 0.91
SREBF1-219ENST00000580540 TMEM57Q8N5G2 664 aa20.74■□□□□ 0.91
SREBF1-219ENST00000580540 SCAF8Q9UPN6 1271 aaKnown RBP20.74■□□□□ 0.91
SREBF1-219ENST00000580540 IQSEC3Q9UPP2 1182 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-219ENST00000580540 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-219ENST00000580540 SASH1O94885 1247 aa20.73■□□□□ 0.91
SREBF1-219ENST00000580540 CAVIN4Q5BKX8 364 aa20.73■□□□□ 0.91
SREBF1-219ENST00000580540 FTSJ3Q8IY81 847 aaKnown RBP20.73■□□□□ 0.91
SREBF1-219ENST00000580540 CERS5Q8N5B7 392 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms