RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 ZNF804AQ7Z570 1209 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
NDEL1-208ENST00000580237 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 DPF2Q92785 391 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 CLUAP1Q96AJ1 413 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 MROH5Q6ZUA9 1318 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
NDEL1-208ENST00000580237 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
NDEL1-208ENST00000580237 METTL24Q5JXM2 366 aa13.63□□□□□ -0.23
NDEL1-208ENST00000580237 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
NDEL1-208ENST00000580237 TXNRD3Q86VQ6 643 aa13.63□□□□□ -0.23
NDEL1-208ENST00000580237 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
NDEL1-208ENST00000580237 ZNF609O15014 1411 aa13.63□□□□□ -0.23
NDEL1-208ENST00000580237 GNAI3P08754 354 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
NDEL1-208ENST00000580237 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 RBM26Q5T8P6 1007 aaKnown RBP13.62□□□□□ -0.23
NDEL1-208ENST00000580237 INTS3Q68E01 1043 aaKnown RBP13.62□□□□□ -0.23
NDEL1-208ENST00000580237 SAMD7Q7Z3H4 446 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 MEIS3Q99687 375 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 PUS3Q9BZE2 481 aaKnown RBP13.62□□□□□ -0.23
NDEL1-208ENST00000580237 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 PASKQ96RG2 1323 aa13.62□□□□□ -0.23
NDEL1-208ENST00000580237 SNAP23O00161 211 aa13.61□□□□□ -0.23
NDEL1-208ENST00000580237 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
NDEL1-208ENST00000580237 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
NDEL1-208ENST00000580237 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 ITGBL1O95965 494 aaPredicted RBP13.6□□□□□ -0.23
NDEL1-208ENST00000580237 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 GTF2IP78347 998 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 VPS37DQ86XT2 251 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 KLRG1Q96E93 195 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 CD209Q9NNX6 404 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
NDEL1-208ENST00000580237 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
NDEL1-208ENST00000580237 UBE4AQ14139 1066 aa13.59□□□□□ -0.23
NDEL1-208ENST00000580237 LRRC24Q50LG9 513 aa13.59□□□□□ -0.23
NDEL1-208ENST00000580237 DACT2Q5SW24 774 aa13.59□□□□□ -0.23
NDEL1-208ENST00000580237 TTLL5Q6EMB2 1281 aa13.59□□□□□ -0.23
NDEL1-208ENST00000580237 C15orf52Q6ZUT6 534 aaKnown RBP13.59□□□□□ -0.23
NDEL1-208ENST00000580237 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
NDEL1-208ENST00000580237 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
NDEL1-208ENST00000580237 DCPSQ96C86 337 aaKnown RBP13.59□□□□□ -0.23
NDEL1-208ENST00000580237 GLIS2Q9BZE0 524 aaPredicted RBP13.59□□□□□ -0.23
NDEL1-208ENST00000580237 SIL1Q9H173 461 aa13.59□□□□□ -0.23
NDEL1-208ENST00000580237 EYA2O00167 538 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 TRAF5O00463 557 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
NDEL1-208ENST00000580237 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 MXD3Q9BW11 206 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
NDEL1-208ENST00000580237 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 RIPOR2Q9Y4F9 1068 aa13.58□□□□□ -0.24
NDEL1-208ENST00000580237 FRAT2O75474 233 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-208ENST00000580237 PDE8BO95263 885 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 EGFRP00533 1210 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 GNAI2P04899 355 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
NDEL1-208ENST00000580237 GYG1P46976 350 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 ZNF280AP59817 542 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-208ENST00000580237 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
NDEL1-208ENST00000580237 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-208ENST00000580237 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 DZIP1LQ8IYY4 767 aaKnown RBP13.57□□□□□ -0.24
NDEL1-208ENST00000580237 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 IRS2Q9Y4H2 1338 aa13.57□□□□□ -0.24
NDEL1-208ENST00000580237 SRGAP3O43295 1099 aa13.56□□□□□ -0.24
NDEL1-208ENST00000580237 SLC5A1P13866 664 aa13.56□□□□□ -0.24
NDEL1-208ENST00000580237 HIBADHP31937 336 aaKnown RBP13.56□□□□□ -0.24
NDEL1-208ENST00000580237 RFX5P48382 616 aaPredicted RBP13.56□□□□□ -0.24
NDEL1-208ENST00000580237 PTPN12Q05209 780 aaKnown RBP13.56□□□□□ -0.24
NDEL1-208ENST00000580237 GMLQ99445 158 aa13.56□□□□□ -0.24
NDEL1-208ENST00000580237 CEP350Q5VT06 3117 aa13.56□□□□□ -0.24
NDEL1-208ENST00000580237 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-208ENST00000580237 CIAO1O76071 339 aa13.55□□□□□ -0.24
NDEL1-208ENST00000580237 CELF2O95319 508 aaKnown RBP13.55□□□□□ -0.24
NDEL1-208ENST00000580237 IL1R1P14778 569 aa13.55□□□□□ -0.24
NDEL1-208ENST00000580237 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.24
NDEL1-208ENST00000580237 DNAJC5GQ8N7S2 189 aa13.55□□□□□ -0.24
NDEL1-208ENST00000580237 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
NDEL1-208ENST00000580237 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
NDEL1-208ENST00000580237 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
NDEL1-208ENST00000580237 ADM5C9JUS6 153 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 SASH1O94885 1247 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 MS4A1P11836 297 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 IL15P40933 162 aaPredicted RBP13.54□□□□□ -0.24
NDEL1-208ENST00000580237 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms