RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TNRC6CQ9HCJ0 1690 aaKnown RBP24.33■■□□□ 1.49
SMG8-203ENST00000578922 TM4SF1P30408 202 aa24.33■■□□□ 1.48
SMG8-203ENST00000578922 HSPA4P34932 840 aa24.33■■□□□ 1.48
SMG8-203ENST00000578922 DDR1Q08345 913 aa24.33■■□□□ 1.48
SMG8-203ENST00000578922 RPS8P62241 208 aaKnown RBP24.32■■□□□ 1.48
SMG8-203ENST00000578922 CCDC129Q6ZRS4 1044 aa24.32■■□□□ 1.48
SMG8-203ENST00000578922 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
SMG8-203ENST00000578922 MINPP1Q9UNW1 487 aa24.32■■□□□ 1.48
SMG8-203ENST00000578922 HMGB2P26583 209 aaKnown RBP24.31■■□□□ 1.48
SMG8-203ENST00000578922 EN1Q05925 392 aaPredicted RBP24.31■■□□□ 1.48
SMG8-203ENST00000578922 EZH2Q15910 746 aaKnown RBP24.3■■□□□ 1.48
SMG8-203ENST00000578922 GBP4Q96PP9 640 aa24.3■■□□□ 1.48
SMG8-203ENST00000578922 MED23Q9ULK4 1368 aa24.3■■□□□ 1.48
SMG8-203ENST00000578922 BCAMP50895 628 aa24.3■■□□□ 1.48
SMG8-203ENST00000578922 K7ELQ4 463 aaPredicted RBP24.29■■□□□ 1.48
SMG8-203ENST00000578922 KCNJ4P48050 445 aa24.29■■□□□ 1.48
SMG8-203ENST00000578922 ST5P78524 1137 aa24.29■■□□□ 1.48
SMG8-203ENST00000578922 PRPF40BQ6NWY9 871 aaKnown RBP24.29■■□□□ 1.48
SMG8-203ENST00000578922 RFX7Q2KHR2 1363 aa24.29■■□□□ 1.48
SMG8-203ENST00000578922 POLRMTO00411 1230 aaKnown RBP24.29■■□□□ 1.48
SMG8-203ENST00000578922 EPB41L2O43491 1005 aaKnown RBP24.29■■□□□ 1.48
SMG8-203ENST00000578922 RAB3GAP1Q15042 981 aa24.29■■□□□ 1.48
SMG8-203ENST00000578922 SLC51AQ86UW1 340 aa24.29■■□□□ 1.48
SMG8-203ENST00000578922 RASEFQ8IZ41 740 aa24.29■■□□□ 1.48
SMG8-203ENST00000578922 NEK4P51957 841 aa24.28■■□□□ 1.48
SMG8-203ENST00000578922 ANAPC15P60006 121 aa24.28■■□□□ 1.48
SMG8-203ENST00000578922 MCMDC2Q4G0Z9 681 aa24.27■■□□□ 1.48
SMG8-203ENST00000578922 UPF3BQ9BZI7 483 aaKnown RBP24.27■■□□□ 1.48
SMG8-203ENST00000578922 RBM8AQ9Y5S9 174 aaKnown RBP24.27■■□□□ 1.48
SMG8-203ENST00000578922 SNX14Q9Y5W7 946 aa24.27■■□□□ 1.48
SMG8-203ENST00000578922 RNF113AO15541 343 aaKnown RBP24.27■■□□□ 1.48
SMG8-203ENST00000578922 CYP2E1P05181 493 aaPredicted RBP24.27■■□□□ 1.48
SMG8-203ENST00000578922 UQCRFS1P1P0C7P4 283 aa24.27■■□□□ 1.48
SMG8-203ENST00000578922 ARID4AP29374 1257 aaPredicted RBP24.27■■□□□ 1.48
SMG8-203ENST00000578922 ZNF512BQ96KM6 892 aaPredicted RBP24.27■■□□□ 1.48
SMG8-203ENST00000578922 SKOR2Q2VWA4 1001 aaPredicted RBP24.26■■□□□ 1.47
SMG8-203ENST00000578922 MSL1Q68DK7 614 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 TNPO1Q92973 898 aaKnown RBP24.26■■□□□ 1.47
SMG8-203ENST00000578922 HMG20BQ9P0W2 317 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 IQSEC3Q9UPP2 1182 aaPredicted RBP24.26■■□□□ 1.47
SMG8-203ENST00000578922 PNPLA7Q6ZV29 1317 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 ARAP2Q8WZ64 1704 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 AKAP11Q9UKA4 1901 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 ST18O60284 1047 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 RASGRF1Q13972 1273 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 MAP4K1Q92918 833 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 FOXD4L1Q9NU39 408 aa24.26■■□□□ 1.47
SMG8-203ENST00000578922 XRCC6P12956 609 aaKnown RBP eCLIP24.25■■□□□ 1.47
SMG8-203ENST00000578922 GYG1P46976 350 aa24.25■■□□□ 1.47
SMG8-203ENST00000578922 RPGRQ92834 1020 aaKnown RBP24.25■■□□□ 1.47
SMG8-203ENST00000578922 ANO8Q9HCE9 1232 aaPredicted RBP24.25■■□□□ 1.47
SMG8-203ENST00000578922 PIH1D3Q9NQM4 214 aaKnown RBP24.25■■□□□ 1.47
SMG8-203ENST00000578922 HSP90AA1P07900 732 aaKnown RBP24.25■■□□□ 1.47
SMG8-203ENST00000578922 MRE11P49959 708 aa24.25■■□□□ 1.47
SMG8-203ENST00000578922 ZMYM1Q5SVZ6 1142 aa24.25■■□□□ 1.47
SMG8-203ENST00000578922 WASHC4Q2M389 1173 aa24.24■■□□□ 1.47
SMG8-203ENST00000578922 SPATA5Q8NB90 893 aa24.24■■□□□ 1.47
SMG8-203ENST00000578922 CAMKK2Q96RR4 588 aa24.24■■□□□ 1.47
SMG8-203ENST00000578922 IDH1O75874 414 aaKnown RBP24.23■■□□□ 1.47
SMG8-203ENST00000578922 NLGN1Q8N2Q7 840 aa24.23■■□□□ 1.47
SMG8-203ENST00000578922 KLRK1P26718 216 aa24.23■■□□□ 1.47
SMG8-203ENST00000578922 GRAPQ13588 217 aa24.23■■□□□ 1.47
SMG8-203ENST00000578922 NECTIN1Q15223 517 aa24.23■■□□□ 1.47
SMG8-203ENST00000578922 FLAD1Q8NFF5 587 aa24.23■■□□□ 1.47
SMG8-203ENST00000578922 GRAPLQ8TC17 118 aaPredicted RBP24.23■■□□□ 1.47
SMG8-203ENST00000578922 HELLSQ9NRZ9 838 aa24.23■■□□□ 1.47
SMG8-203ENST00000578922 A0A1B0GUL6 1792 aa24.22■■□□□ 1.47
SMG8-203ENST00000578922 M0R2C6 588 aa24.22■■□□□ 1.47
SMG8-203ENST00000578922 UBE4AQ14139 1066 aa24.22■■□□□ 1.47
SMG8-203ENST00000578922 CREB3L3Q68CJ9 461 aa24.22■■□□□ 1.47
SMG8-203ENST00000578922 NOL8Q76FK4 1167 aaKnown RBP24.22■■□□□ 1.47
SMG8-203ENST00000578922 OSBP2Q969R2 916 aa24.22■■□□□ 1.47
SMG8-203ENST00000578922 MAST3O60307 1309 aa24.22■■□□□ 1.47
SMG8-203ENST00000578922 VPS53Q5VIR6 699 aa24.21■■□□□ 1.47
SMG8-203ENST00000578922 GZF1Q9H116 711 aaPredicted RBP24.21■■□□□ 1.47
SMG8-203ENST00000578922 MMP10P09238 476 aa24.2■■□□□ 1.47
SMG8-203ENST00000578922 CPA1P15085 419 aa24.2■■□□□ 1.47
SMG8-203ENST00000578922 TTF1Q15361 905 aaPredicted RBP24.2■■□□□ 1.47
SMG8-203ENST00000578922 LRRFIP1Q32MZ4 808 aaKnown RBP24.2■■□□□ 1.47
SMG8-203ENST00000578922 CLEC17AQ6ZS10 378 aa24.2■■□□□ 1.47
SMG8-203ENST00000578922 SLC27A2O14975 620 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 ADCK5Q3MIX3 580 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 CRY2Q49AN0 593 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 SLC9C2Q5TAH2 1124 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 DEFB132Q7Z7B7 95 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 VPS37DQ86XT2 251 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.2■■□□□ 1.46
SMG8-203ENST00000578922 ANKRD2Q9GZV1 360 aa24.2■■□□□ 1.46
SMG8-203ENST00000578922 IL17RAQ96F46 866 aa24.19■■□□□ 1.46
SMG8-203ENST00000578922 TAF6LQ9Y6J9 622 aa24.19■■□□□ 1.46
SMG8-203ENST00000578922 MYO5AQ9Y4I1 1855 aaKnown RBP24.19■■□□□ 1.46
SMG8-203ENST00000578922 ZFYP08048 801 aaPredicted RBP24.19■■□□□ 1.46
SMG8-203ENST00000578922 CAVIN4Q5BKX8 364 aa24.19■■□□□ 1.46
SMG8-203ENST00000578922 JAKMIP1Q96N16 626 aaKnown RBP24.19■■□□□ 1.46
SMG8-203ENST00000578922 ANKIB1Q9P2G1 1089 aa24.19■■□□□ 1.46
SMG8-203ENST00000578922 ZKSCAN1P17029 563 aaPredicted RBP24.18■■□□□ 1.46
SMG8-203ENST00000578922 CASTP20810 708 aaKnown RBP24.18■■□□□ 1.46
SMG8-203ENST00000578922 SF3B2Q13435 895 aaKnown RBP24.18■■□□□ 1.46
SMG8-203ENST00000578922 SLC15A2Q16348 729 aa24.18■■□□□ 1.46
SMG8-203ENST00000578922 PUS7LQ9H0K6 701 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms