RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-210ENST00000578916 R3HDMLQ9H3Y0 253 aa11.84□□□□□ -0.51
PTPRM-210ENST00000578916 TRIM17Q9Y577 477 aa11.84□□□□□ -0.51
PTPRM-210ENST00000578916 SCN9AQ15858 1988 aa11.84□□□□□ -0.51
PTPRM-210ENST00000578916 WNT10BO00744 389 aa11.83□□□□□ -0.52
PTPRM-210ENST00000578916 PDE8AO60658 829 aa11.83□□□□□ -0.52
PTPRM-210ENST00000578916 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
PTPRM-210ENST00000578916 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
PTPRM-210ENST00000578916 MYD88Q99836 296 aa11.83□□□□□ -0.52
PTPRM-210ENST00000578916 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
PTPRM-210ENST00000578916 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
PTPRM-210ENST00000578916 SASH1O94885 1247 aa11.82□□□□□ -0.52
PTPRM-210ENST00000578916 PCCAP05165 728 aaPredicted RBP11.82□□□□□ -0.52
PTPRM-210ENST00000578916 INHBEP58166 350 aa11.82□□□□□ -0.52
PTPRM-210ENST00000578916 DACT2Q5SW24 774 aa11.82□□□□□ -0.52
PTPRM-210ENST00000578916 APOBEC3FQ8IUX4 373 aaKnown RBP11.82□□□□□ -0.52
PTPRM-210ENST00000578916 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
PTPRM-210ENST00000578916 ANGEL1Q9UNK9 670 aaKnown RBP11.82□□□□□ -0.52
PTPRM-210ENST00000578916 MYO3BQ8WXR4 1341 aa11.82□□□□□ -0.52
PTPRM-210ENST00000578916 MANSC4A6NHS7 340 aaPredicted RBP11.81□□□□□ -0.52
PTPRM-210ENST00000578916 MMP14P50281 582 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 IFNL1Q8IU54 200 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 CCDC146Q8IYE0 955 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 CCDC191Q8NCU4 936 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 JARID2Q92833 1246 aaPredicted RBP11.81□□□□□ -0.52
PTPRM-210ENST00000578916 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
PTPRM-210ENST00000578916 CDC5LQ99459 802 aaKnown RBP11.81□□□□□ -0.52
PTPRM-210ENST00000578916 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
PTPRM-210ENST00000578916 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
PTPRM-210ENST00000578916 STRIP1Q5VSL9 837 aa11.8□□□□□ -0.52
PTPRM-210ENST00000578916 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
PTPRM-210ENST00000578916 WTIPA6NIX2 430 aaPredicted RBP11.79□□□□□ -0.52
PTPRM-210ENST00000578916 CCT4P50991 539 aaKnown RBP11.79□□□□□ -0.52
PTPRM-210ENST00000578916 COA1Q9GZY4 146 aa11.79□□□□□ -0.52
PTPRM-210ENST00000578916 PHAXQ9H814 394 aaKnown RBP11.79□□□□□ -0.52
PTPRM-210ENST00000578916 MINPP1Q9UNW1 487 aa11.79□□□□□ -0.52
PTPRM-210ENST00000578916 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
PTPRM-210ENST00000578916 PTPN22Q9Y2R2 807 aa11.79□□□□□ -0.52
PTPRM-210ENST00000578916 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
PTPRM-210ENST00000578916 ZBTB48P10074 688 aaPredicted RBP11.78□□□□□ -0.52
PTPRM-210ENST00000578916 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
PTPRM-210ENST00000578916 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTPRM-210ENST00000578916 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
PTPRM-210ENST00000578916 OTUD7BQ6GQQ9 843 aa11.78□□□□□ -0.52
PTPRM-210ENST00000578916 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
PTPRM-210ENST00000578916 WNK4Q96J92 1243 aa11.78□□□□□ -0.52
PTPRM-210ENST00000578916 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
PTPRM-210ENST00000578916 BSDC1Q9NW68 430 aaPredicted RBP11.78□□□□□ -0.52
PTPRM-210ENST00000578916 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
PTPRM-210ENST00000578916 IGF2BP3O00425 579 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTPRM-210ENST00000578916 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.53
PTPRM-210ENST00000578916 CTSWP56202 376 aa11.77□□□□□ -0.53
PTPRM-210ENST00000578916 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
PTPRM-210ENST00000578916 RUNDC1Q96C34 613 aa11.77□□□□□ -0.53
PTPRM-210ENST00000578916 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
PTPRM-210ENST00000578916 TMEM106CQ9BVX2 250 aa11.77□□□□□ -0.53
PTPRM-210ENST00000578916 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
PTPRM-210ENST00000578916 MKI67P46013 3256 aaKnown RBP11.77□□□□□ -0.53
PTPRM-210ENST00000578916 GTF2IP78347 998 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 MAP3K11Q16584 847 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 TXNRD3Q86VQ6 643 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 ARMC5Q96C12 935 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 ZBED3Q96IU2 234 aaPredicted RBP11.76□□□□□ -0.53
PTPRM-210ENST00000578916 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 GREM2Q9H772 168 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 PSME4Q14997 1843 aa11.76□□□□□ -0.53
PTPRM-210ENST00000578916 HTTP42858 3142 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 ELL2O00472 640 aaPredicted RBP11.75□□□□□ -0.53
PTPRM-210ENST00000578916 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
PTPRM-210ENST00000578916 SP3Q02447 781 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 CRHR2Q13324 411 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 RALBP1Q15311 655 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 SUPT20HL1Q3ZLR7 823 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
PTPRM-210ENST00000578916 COL1A1P02452 1464 aaPredicted RBP11.75□□□□□ -0.53
PTPRM-210ENST00000578916 MYO1BO43795 1136 aa11.74□□□□□ -0.53
PTPRM-210ENST00000578916 KCNJ4P48050 445 aa11.74□□□□□ -0.53
PTPRM-210ENST00000578916 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
PTPRM-210ENST00000578916 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
PTPRM-210ENST00000578916 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTPRM-210ENST00000578916 ANKRD2Q9GZV1 360 aa11.74□□□□□ -0.53
PTPRM-210ENST00000578916 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
PTPRM-210ENST00000578916 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
PTPRM-210ENST00000578916 KLRK1P26718 216 aa11.73□□□□□ -0.53
PTPRM-210ENST00000578916 SLC4A8Q2Y0W8 1093 aa11.73□□□□□ -0.53
PTPRM-210ENST00000578916 NBPF11Q86T75 865 aa11.73□□□□□ -0.53
PTPRM-210ENST00000578916 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
PTPRM-210ENST00000578916 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
PTPRM-210ENST00000578916 GJA5P36382 358 aa11.72□□□□□ -0.53
PTPRM-210ENST00000578916 NEXNQ0ZGT2 675 aa11.72□□□□□ -0.53
PTPRM-210ENST00000578916 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms