RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	NECTIN2	Q92692	538 aa		11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	DCPS	Q96C86	337 aa	Known RBP	11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	DBNDD1	Q9H9R9	158 aa		11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	ZNF646	O15015	1829 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	PAPPA2	Q9BXP8	1791 aa		11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	EGFR	P00533	1210 aa		11.42	□□□□□ -0.58
NUP85-208	ENST00000578830	ZNF157	P51786	506 aa	Predicted RBP	11.42	□□□□□ -0.58
NUP85-208	ENST00000578830	KIF23	Q02241	960 aa	Predicted RBP	11.42	□□□□□ -0.58
NUP85-208	ENST00000578830	CELF1	Q92879	486 aa	Known RBP	11.42	□□□□□ -0.58
NUP85-208	ENST00000578830	EYA3	Q99504	573 aa		11.42	□□□□□ -0.58
NUP85-208	ENST00000578830	POLL	Q9UGP5	575 aa		11.42	□□□□□ -0.58
NUP85-208	ENST00000578830	RTL9	Q8NET4	1388 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	MKI67	P46013	3256 aa	Known RBP	11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	ADM5	C9JUS6	153 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	C6orf229	H3BNL8	230 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	RIMBP2	O15034	1052 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	ECE2	O60344	883 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	TMPO	P42166	694 aa	Known RBP	11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	GPSM2	P81274	684 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	FAM9B	Q8IZU0	186 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	PLBD2	Q8NHP8	589 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	FAM163A	Q96GL9	167 aa	Predicted RBP	11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	ISCA1	Q9BUE6	129 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	KCNQ5	Q9NR82	932 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	RNF186	Q9NXI6	227 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	ZNF609	O15014	1411 aa		11.41	□□□□□ -0.58
NUP85-208	ENST00000578830	ECM29	Q5VYK3	1845 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	TRPA1	O75762	1119 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	SLC10A3	P09131	477 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	VIL1	P09327	827 aa	Known RBP	11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	DOK7	Q18PE1	504 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	KIF4B	Q2VIQ3	1234 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	RBM26	Q5T8P6	1007 aa	Known RBP	11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	LCE2D	Q5TA82	110 aa	Predicted RBP	11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	ANKRD13D	Q6ZTN6	518 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	SULF1	Q8IWU6	871 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	TBC1D16	Q8TBP0	767 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	FAM89A	Q96GI7	184 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	YTHDC1	Q96MU7	727 aa	Known RBP	11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	CHPF2	Q9P2E5	772 aa		11.4	□□□□□ -0.58
NUP85-208	ENST00000578830	LAMB1	P07942	1786 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	HTT	P42858	3142 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	CHL1	O00533	1208 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	HOXB7	P09629	217 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	RPS8	P62241	208 aa	Known RBP	11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	ZNF428	Q96B54	188 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	CSRNP1	Q96S65	589 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	PODXL2	Q9NZ53	605 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	STK24	Q9Y6E0	443 aa		11.39	□□□□□ -0.59
NUP85-208	ENST00000578830	ATP5J2-PTCD1	G3V325	749 aa		11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	TRIM28	Q13263	835 aa	Known RBP	11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	KRT24	Q2M2I5	525 aa		11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	HDGFL1	Q5TGJ6	251 aa		11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	CTU1	Q7Z7A3	348 aa	Known RBP	11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	CDCA5	Q96FF9	252 aa		11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	GGA3	Q9NZ52	723 aa		11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	DBF4	Q9UBU7	674 aa	Predicted RBP	11.38	□□□□□ -0.59
NUP85-208	ENST00000578830	CACNA1F	O60840	1977 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	STK25	O00506	426 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	IRS4	O14654	1257 aa	Predicted RBP	11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	HSP90B1	P14625	803 aa	Known RBP	11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	SOX10	P56693	466 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	ZNF280A	P59817	542 aa	Predicted RBP	11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	FKBP1B	P68106	108 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	WDR43	Q15061	677 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	AGBL3	Q8NEM8	1001 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	HYPK	Q9NX55	129 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	BRCA2	P51587	3418 aa		11.37	□□□□□ -0.59
NUP85-208	ENST00000578830	ASTN2	O75129	1339 aa	Predicted RBP	11.36	□□□□□ -0.59
NUP85-208	ENST00000578830		G3V3G9	751 aa		11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	SCARF1	Q14162	830 aa		11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	RTL5	Q5HYW3	569 aa	Predicted RBP	11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	RASAL3	Q86YV0	1011 aa		11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	ANKIB1	Q9P2G1	1089 aa		11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	TAOK2	Q9UL54	1235 aa		11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	LAS1L	Q9Y4W2	734 aa	Known RBP	11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	KIAA0100	Q14667	2235 aa	Known RBP	11.36	□□□□□ -0.59
NUP85-208	ENST00000578830	PITPNM2	Q9BZ72	1349 aa		11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	UFL1	O94874	794 aa		11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	NEUROD2	Q15784	382 aa		11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	PKN2	Q16513	984 aa	Known RBP	11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	ANGEL2	Q5VTE6	544 aa	Known RBP	11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	GGA1	Q9UJY5	639 aa		11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	BOLA1	Q9Y3E2	137 aa		11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.35	□□□□□ -0.59
NUP85-208	ENST00000578830	POTEM	A6NI47	508 aa		11.34	□□□□□ -0.59
NUP85-208	ENST00000578830	PRPF38B	Q5VTL8	546 aa	Known RBP	11.34	□□□□□ -0.59
NUP85-208	ENST00000578830	MS4A4A	Q96JQ5	239 aa		11.34	□□□□□ -0.59
NUP85-208	ENST00000578830	GML	Q99445	158 aa		11.34	□□□□□ -0.59
NUP85-208	ENST00000578830	MYOZ2	Q9NPC6	264 aa		11.34	□□□□□ -0.59
NUP85-208	ENST00000578830	SEC31B	Q9NQW1	1179 aa		11.34	□□□□□ -0.59
NUP85-208	ENST00000578830	USP17L8	P0C7I0	530 aa		11.33	□□□□□ -0.6
NUP85-208	ENST00000578830	CCDC152	Q4G0S7	254 aa		11.33	□□□□□ -0.6
NUP85-208	ENST00000578830	DUSP27	Q5VZP5	1158 aa		11.33	□□□□□ -0.6
NUP85-208	ENST00000578830	POTEG	Q6S5H5	508 aa		11.33	□□□□□ -0.6

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