RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 LEMD3Q9Y2U8 911 aa14.94□□□□□ -0.02
IFT20-207ENST00000578547 FPGT-TNNI3KV9GXZ4 949 aa14.94□□□□□ -0.02
IFT20-207ENST00000578547 GOLGB1Q14789 3259 aaKnown RBP14.94□□□□□ -0.02
IFT20-207ENST00000578547 LTBP3Q9NS15 1303 aa14.93□□□□□ -0.02
IFT20-207ENST00000578547 A0A1B0GUL7 405 aa14.93□□□□□ -0.02
IFT20-207ENST00000578547 IFIT1P09914 478 aaKnown RBP14.93□□□□□ -0.02
IFT20-207ENST00000578547 TIMM10P62072 90 aa14.93□□□□□ -0.02
IFT20-207ENST00000578547 NUCB1Q02818 461 aa14.93□□□□□ -0.02
IFT20-207ENST00000578547 LPIN2Q92539 896 aa14.93□□□□□ -0.02
IFT20-207ENST00000578547 ARAP2Q8WZ64 1704 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
IFT20-207ENST00000578547 FGFR2P21802 821 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 ADORA1P30542 326 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 UBE4AQ14139 1066 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 CHD1LQ86WJ1 897 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 SUPT20HQ8NEM7 779 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 EAF2Q96CJ1 260 aaPredicted RBP14.92□□□□□ -0.02
IFT20-207ENST00000578547 EYA3Q99504 573 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 CCDC8Q9H0W5 538 aaPredicted RBP14.92□□□□□ -0.02
IFT20-207ENST00000578547 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 TLR7Q9NYK1 1049 aaKnown RBP14.92□□□□□ -0.02
IFT20-207ENST00000578547 FER1L6Q2WGJ9 1857 aa14.92□□□□□ -0.02
IFT20-207ENST00000578547 WASHC4Q2M389 1173 aa14.91□□□□□ -0.02
IFT20-207ENST00000578547 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
IFT20-207ENST00000578547 TXNRD3Q86VQ6 643 aa14.91□□□□□ -0.02
IFT20-207ENST00000578547 DBNDD2Q9BQY9 259 aa14.91□□□□□ -0.02
IFT20-207ENST00000578547 MED23Q9ULK4 1368 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 PPIP5K2O43314 1243 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 LMNB1P20700 586 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 IARSP41252 1262 aaKnown RBP14.9□□□□□ -0.02
IFT20-207ENST00000578547 GYG1P46976 350 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 AOC3Q16853 763 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 C9orf131Q5VYM1 1079 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 C16orf71Q8IYS4 520 aaPredicted RBP14.9□□□□□ -0.02
IFT20-207ENST00000578547 OTUD7AQ8TE49 926 aaPredicted RBP14.9□□□□□ -0.02
IFT20-207ENST00000578547 XAGE2Q96GT9 111 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 ZC3H12CQ9C0D7 883 aaKnown RBP14.9□□□□□ -0.02
IFT20-207ENST00000578547 DBNLQ9UJU6 430 aaKnown RBP14.9□□□□□ -0.02
IFT20-207ENST00000578547 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
IFT20-207ENST00000578547 G3V3G9 751 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 KIAA2012Q0VF49 1180 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 CAVIN4Q5BKX8 364 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 VPS37DQ86XT2 251 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 LARGE2Q8N3Y3 721 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 VPS33BQ9H267 617 aa14.89□□□□□ -0.03
IFT20-207ENST00000578547 BCAMP50895 628 aa14.88□□□□□ -0.03
IFT20-207ENST00000578547 DOK7Q18PE1 504 aa14.88□□□□□ -0.03
IFT20-207ENST00000578547 C15orf52Q6ZUT6 534 aaKnown RBP14.88□□□□□ -0.03
IFT20-207ENST00000578547 ZNF804AQ7Z570 1209 aa14.88□□□□□ -0.03
IFT20-207ENST00000578547 SKAP1Q86WV1 359 aa14.88□□□□□ -0.03
IFT20-207ENST00000578547 RNF181Q9P0P0 153 aa14.88□□□□□ -0.03
IFT20-207ENST00000578547 HIBADHP31937 336 aaKnown RBP14.87□□□□□ -0.03
IFT20-207ENST00000578547 PHKA1P46020 1223 aa14.87□□□□□ -0.03
IFT20-207ENST00000578547 TTC39AQ5SRH9 613 aa14.87□□□□□ -0.03
IFT20-207ENST00000578547 TSHZ3Q63HK5 1081 aa14.87□□□□□ -0.03
IFT20-207ENST00000578547 GPATCH3Q96I76 525 aa14.87□□□□□ -0.03
IFT20-207ENST00000578547 FAM84BQ96KN1 310 aaPredicted RBP14.87□□□□□ -0.03
IFT20-207ENST00000578547 DBNDD1Q9H9R9 158 aa14.87□□□□□ -0.03
IFT20-207ENST00000578547 IQSEC3Q9UPP2 1182 aaPredicted RBP14.87□□□□□ -0.03
IFT20-207ENST00000578547 COL4A5P29400 1685 aa14.87□□□□□ -0.03
IFT20-207ENST00000578547 MX1P20591 662 aa14.86□□□□□ -0.03
IFT20-207ENST00000578547 PDE4AP27815 886 aa14.86□□□□□ -0.03
IFT20-207ENST00000578547 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
IFT20-207ENST00000578547 CCDC102BQ68D86 513 aa14.86□□□□□ -0.03
IFT20-207ENST00000578547 SBF1O95248 1867 aa14.85□□□□□ -0.03
IFT20-207ENST00000578547 FRAT2O75474 233 aaPredicted RBP14.85□□□□□ -0.03
IFT20-207ENST00000578547 NIM1KQ8IY84 436 aa14.85□□□□□ -0.03
IFT20-207ENST00000578547 JDP2Q8WYK2 163 aa14.85□□□□□ -0.03
IFT20-207ENST00000578547 FBXW7Q969H0 707 aa14.85□□□□□ -0.03
IFT20-207ENST00000578547 COA1Q9GZY4 146 aa14.85□□□□□ -0.03
IFT20-207ENST00000578547 UTRNP46939 3433 aa14.85□□□□□ -0.03
IFT20-207ENST00000578547 FZD9O00144 591 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 ECE2O60344 883 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 RGS3P49796 1198 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 FBXO33Q7Z6M2 555 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 CD209Q9NNX6 404 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 KCNQ5Q9NR82 932 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 ECHDC1Q9NTX5 307 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 GNL3LQ9NVN8 582 aaKnown RBP14.84□□□□□ -0.03
IFT20-207ENST00000578547 ZNRF3Q9ULT6 936 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 SALL3Q9BXA9 1300 aa14.84□□□□□ -0.03
IFT20-207ENST00000578547 CCDC88AQ3V6T2 1871 aa14.83□□□□□ -0.04
IFT20-207ENST00000578547 YDJCA8MPS7 323 aa14.83□□□□□ -0.04
IFT20-207ENST00000578547 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
IFT20-207ENST00000578547 CHAF1AQ13111 956 aaPredicted RBP14.83□□□□□ -0.04
IFT20-207ENST00000578547 SCARF1Q14162 830 aa14.83□□□□□ -0.04
IFT20-207ENST00000578547 JAG2Q9Y219 1238 aa14.83□□□□□ -0.04
IFT20-207ENST00000578547 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
IFT20-207ENST00000578547 MYH13Q9UKX3 1938 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
IFT20-207ENST00000578547 PDE1AP54750 535 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 RASGRF1Q13972 1273 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 PLEKHM2Q8IWE5 1019 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 SNRKQ9NRH2 765 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 TIAM2Q8IVF5 1701 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 TTC41PQ6P2S7 1318 aa14.82□□□□□ -0.04
IFT20-207ENST00000578547 RAD17O75943 681 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms