RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 GNPATO15228 680 aa13.27□□□□□ -0.29
SKA2-204ENST00000578519 RFC4P35249 363 aa13.27□□□□□ -0.29
SKA2-204ENST00000578519 GSE1Q14687 1217 aa13.27□□□□□ -0.29
SKA2-204ENST00000578519 SYNE4Q8N205 404 aa13.27□□□□□ -0.29
SKA2-204ENST00000578519 IL25Q9H293 177 aa13.27□□□□□ -0.29
SKA2-204ENST00000578519 NPHP1O15259 732 aa13.26□□□□□ -0.29
SKA2-204ENST00000578519 WASHC4Q2M389 1173 aa13.26□□□□□ -0.29
SKA2-204ENST00000578519 NBPF5PQ86XG9 351 aaPredicted RBP13.26□□□□□ -0.29
SKA2-204ENST00000578519 APPBP2Q92624 585 aa13.26□□□□□ -0.29
SKA2-204ENST00000578519 TTC14Q96N46 770 aa13.26□□□□□ -0.29
SKA2-204ENST00000578519 WDR33Q9C0J8 1336 aaKnown RBP13.25□□□□□ -0.29
SKA2-204ENST00000578519 FGFR2P21802 821 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
SKA2-204ENST00000578519 AK2P54819 239 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 ZNF772Q68DY9 489 aaPredicted RBP13.25□□□□□ -0.29
SKA2-204ENST00000578519 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 EDC3Q96F86 508 aaKnown RBP13.25□□□□□ -0.29
SKA2-204ENST00000578519 NEK1Q96PY6 1258 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 SMC3Q9UQE7 1217 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
SKA2-204ENST00000578519 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 IGSF3O75054 1194 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 RPS6KB1P23443 525 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 ADORA1P30542 326 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
SKA2-204ENST00000578519 ZAP70P43403 619 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 MAP3K12Q12852 859 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 UBE3CQ15386 1083 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
SKA2-204ENST00000578519 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
SKA2-204ENST00000578519 TRAK2O60296 914 aa13.23□□□□□ -0.29
SKA2-204ENST00000578519 PDCP20941 246 aa13.23□□□□□ -0.29
SKA2-204ENST00000578519 FGD1P98174 961 aa13.23□□□□□ -0.29
SKA2-204ENST00000578519 IMMTQ16891 758 aaKnown RBP13.23□□□□□ -0.29
SKA2-204ENST00000578519 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
SKA2-204ENST00000578519 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
SKA2-204ENST00000578519 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
SKA2-204ENST00000578519 KIF3AQ9Y496 699 aa13.23□□□□□ -0.29
SKA2-204ENST00000578519 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
SKA2-204ENST00000578519 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
SKA2-204ENST00000578519 MYH3P11055 1940 aa13.22□□□□□ -0.29
SKA2-204ENST00000578519 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
SKA2-204ENST00000578519 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
SKA2-204ENST00000578519 TBC1D9BQ66K14 1250 aa13.22□□□□□ -0.29
SKA2-204ENST00000578519 LHX8Q68G74 356 aa13.22□□□□□ -0.29
SKA2-204ENST00000578519 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
SKA2-204ENST00000578519 NOL8Q76FK4 1167 aaKnown RBP13.22□□□□□ -0.29
SKA2-204ENST00000578519 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
SKA2-204ENST00000578519 RPAP1Q9BWH6 1393 aaPredicted RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 BAG4O95429 457 aaKnown RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 GNAT2P19087 354 aa13.21□□□□□ -0.29
SKA2-204ENST00000578519 CHRNDQ07001 517 aa13.21□□□□□ -0.29
SKA2-204ENST00000578519 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
SKA2-204ENST00000578519 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 SPATA5Q8NB90 893 aa13.21□□□□□ -0.29
SKA2-204ENST00000578519 SEC31BQ9NQW1 1179 aa13.21□□□□□ -0.29
SKA2-204ENST00000578519 ISY1Q9ULR0 285 aaKnown RBP13.21□□□□□ -0.29
SKA2-204ENST00000578519 MAST3O60307 1309 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 SEMA3EO15041 775 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 ADD2P35612 726 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 MCAMP43121 646 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
SKA2-204ENST00000578519 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
SKA2-204ENST00000578519 TRDNQ13061 729 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 ADCK5Q3MIX3 580 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
SKA2-204ENST00000578519 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
SKA2-204ENST00000578519 ZNF213O14771 459 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
SKA2-204ENST00000578519 BRD1O95696 1058 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 PHKA1P46020 1223 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 ST5P78524 1137 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 HELBQ8NG08 1087 aaPredicted RBP13.19□□□□□ -0.3
SKA2-204ENST00000578519 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
SKA2-204ENST00000578519 NACAP1Q9BZK3 213 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 DENND2AQ9ULE3 1009 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 BCORQ6W2J9 1755 aa13.19□□□□□ -0.3
SKA2-204ENST00000578519 BTAF1O14981 1849 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 LRP5O75197 1615 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 ZBTB22O15209 634 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 CYP21A2P08686 494 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
SKA2-204ENST00000578519 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 AIDAQ96BJ3 306 aa13.18□□□□□ -0.3
SKA2-204ENST00000578519 M0R2C6 588 aa13.17□□□□□ -0.3
SKA2-204ENST00000578519 GPAA1O43292 621 aa13.17□□□□□ -0.3
SKA2-204ENST00000578519 PDE6AP16499 860 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms