RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 TPTE2Q6XPS3 522 aa20.48■□□□□ 0.87
SREBF1-218ENST00000578469 NBPF5PQ86XG9 351 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-218ENST00000578469 TICAM2Q86XR7 235 aa20.48■□□□□ 0.87
SREBF1-218ENST00000578469 SNX21Q969T3 373 aa20.48■□□□□ 0.87
SREBF1-218ENST00000578469 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
SREBF1-218ENST00000578469 RFX7Q2KHR2 1363 aa20.47■□□□□ 0.87
SREBF1-218ENST00000578469 LMNB1P20700 586 aa20.47■□□□□ 0.87
SREBF1-218ENST00000578469 SF3B3Q15393 1217 aaKnown RBP20.47■□□□□ 0.87
SREBF1-218ENST00000578469 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
SREBF1-218ENST00000578469 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
SREBF1-218ENST00000578469 TBC1D2Q9BYX2 928 aa20.47■□□□□ 0.87
SREBF1-218ENST00000578469 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
SREBF1-218ENST00000578469 RIC1Q4ADV7 1423 aa20.46■□□□□ 0.87
SREBF1-218ENST00000578469 IFIT1P09914 478 aaKnown RBP20.46■□□□□ 0.87
SREBF1-218ENST00000578469 RASSF7Q02833 373 aa20.46■□□□□ 0.87
SREBF1-218ENST00000578469 TTC39AQ5SRH9 613 aa20.46■□□□□ 0.87
SREBF1-218ENST00000578469 XAGE2Q96GT9 111 aa20.46■□□□□ 0.87
SREBF1-218ENST00000578469 KIF2CQ99661 725 aa20.46■□□□□ 0.87
SREBF1-218ENST00000578469 RAD50Q92878 1312 aa20.46■□□□□ 0.87
SREBF1-218ENST00000578469 PDE8BO95263 885 aa20.45■□□□□ 0.86
SREBF1-218ENST00000578469 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
SREBF1-218ENST00000578469 DLEC1Q9Y238 1755 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 NPHP1O15259 732 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-218ENST00000578469 ANAPC15P60006 121 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 NFIXQ14938 502 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 TTLL6Q8N841 843 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
SREBF1-218ENST00000578469 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
SREBF1-218ENST00000578469 PUM3Q15397 648 aaKnown RBP20.43■□□□□ 0.86
SREBF1-218ENST00000578469 LRRFIP1Q32MZ4 808 aaKnown RBP20.43■□□□□ 0.86
SREBF1-218ENST00000578469 COL13A1Q5TAT6 717 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-218ENST00000578469 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
SREBF1-218ENST00000578469 PAG1Q9NWQ8 432 aa20.43■□□□□ 0.86
SREBF1-218ENST00000578469 NRXN2Q9P2S2 1712 aa20.43■□□□□ 0.86
SREBF1-218ENST00000578469 TIAM2Q8IVF5 1701 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 SLC5A1P13866 664 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 ADORA1P30542 326 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 NMIQ13287 307 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-218ENST00000578469 ANKRD18AQ8IVF6 992 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 TNS4Q8IZW8 715 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 KBTBD3Q8NAB2 608 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 LPIN2Q92539 896 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
SREBF1-218ENST00000578469 H0YIN7 160 aa20.41■□□□□ 0.86
SREBF1-218ENST00000578469 SERPINB2P05120 415 aa20.41■□□□□ 0.86
SREBF1-218ENST00000578469 ZNF512BQ96KM6 892 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-218ENST00000578469 LSG1Q9H089 658 aaKnown RBP20.41■□□□□ 0.86
SREBF1-218ENST00000578469 GOLIM4O00461 696 aa20.4■□□□□ 0.86
SREBF1-218ENST00000578469 ST18O60284 1047 aa20.4■□□□□ 0.86
SREBF1-218ENST00000578469 C2CD5Q86YS7 1000 aa20.4■□□□□ 0.86
SREBF1-218ENST00000578469 EDC3Q96F86 508 aaKnown RBP20.4■□□□□ 0.86
SREBF1-218ENST00000578469 SNRKQ9NRH2 765 aa20.4■□□□□ 0.86
SREBF1-218ENST00000578469 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
SREBF1-218ENST00000578469 HSPA4P34932 840 aa20.39■□□□□ 0.85
SREBF1-218ENST00000578469 DDX46Q7L014 1031 aaKnown RBP20.39■□□□□ 0.85
SREBF1-218ENST00000578469 IL25Q9H293 177 aa20.39■□□□□ 0.85
SREBF1-218ENST00000578469 SPEF2Q9C093 1822 aa20.39■□□□□ 0.85
SREBF1-218ENST00000578469 CAPN15O75808 1086 aa20.38■□□□□ 0.85
SREBF1-218ENST00000578469 FGFR2P21802 821 aa20.38■□□□□ 0.85
SREBF1-218ENST00000578469 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
SREBF1-218ENST00000578469 FAM227BQ96M60 508 aa20.38■□□□□ 0.85
SREBF1-218ENST00000578469 PCNTO95613 3336 aa20.38■□□□□ 0.85
SREBF1-218ENST00000578469 CCDC171Q6TFL3 1326 aa20.37■□□□□ 0.85
SREBF1-218ENST00000578469 FKBP4Q02790 459 aaKnown RBP eCLIP20.37■□□□□ 0.85
SREBF1-218ENST00000578469 C3orf67Q6ZVT6 689 aa20.37■□□□□ 0.85
SREBF1-218ENST00000578469 CNBD1Q8NA66 436 aa20.37■□□□□ 0.85
SREBF1-218ENST00000578469 HELBQ8NG08 1087 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-218ENST00000578469 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
SREBF1-218ENST00000578469 BSDC1Q9NW68 430 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-218ENST00000578469 A0A0D9SFI3 127 aa20.36■□□□□ 0.85
SREBF1-218ENST00000578469 K7ELQ4 463 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-218ENST00000578469 CHRNDQ07001 517 aa20.36■□□□□ 0.85
SREBF1-218ENST00000578469 HELLSQ9NRZ9 838 aa20.36■□□□□ 0.85
SREBF1-218ENST00000578469 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
SREBF1-218ENST00000578469 ZFYP08048 801 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-218ENST00000578469 KCNJ4P48050 445 aa20.35■□□□□ 0.85
SREBF1-218ENST00000578469 TTF1Q15361 905 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-218ENST00000578469 MCMDC2Q4G0Z9 681 aa20.35■□□□□ 0.85
SREBF1-218ENST00000578469 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
SREBF1-218ENST00000578469 NFKBIEO00221 500 aa20.34■□□□□ 0.85
SREBF1-218ENST00000578469 HSPA1AP0DMV8 641 aaKnown RBP20.34■□□□□ 0.85
SREBF1-218ENST00000578469 HSPA1BP0DMV9 641 aaKnown RBP20.34■□□□□ 0.85
SREBF1-218ENST00000578469 PDE6BP35913 854 aa20.34■□□□□ 0.85
SREBF1-218ENST00000578469 RPS8P62241 208 aaKnown RBP20.34■□□□□ 0.85
SREBF1-218ENST00000578469 ST5P78524 1137 aa20.34■□□□□ 0.85
SREBF1-218ENST00000578469 CCDC102BQ68D86 513 aa20.34■□□□□ 0.85
SREBF1-218ENST00000578469 CCDC88AQ3V6T2 1871 aa20.34■□□□□ 0.85
SREBF1-218ENST00000578469 RNF113AO15541 343 aaKnown RBP20.33■□□□□ 0.85
SREBF1-218ENST00000578469 TAF5LO75529 589 aa20.33■□□□□ 0.85
SREBF1-218ENST00000578469 ARID4AP29374 1257 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-218ENST00000578469 MCM2P49736 904 aa20.33■□□□□ 0.85
SREBF1-218ENST00000578469 PTH1RQ03431 593 aa20.33■□□□□ 0.85
SREBF1-218ENST00000578469 RNF20Q5VTR2 975 aa20.33■□□□□ 0.85
SREBF1-218ENST00000578469 ZSCAN25Q6NSZ9 544 aa20.33■□□□□ 0.85
SREBF1-218ENST00000578469 ZNF622Q969S3 477 aaKnown RBP eCLIP20.33■□□□□ 0.85
SREBF1-218ENST00000578469 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.33■□□□□ 0.851e-7■■■□□ 19
SREBF1-218ENST00000578469 PALD1Q9ULE6 856 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms