RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 STK31Q9BXU1 1019 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 USP25Q9UHP3 1055 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 PCDHGC3Q9UN70 934 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 NCAPD2Q15021 1401 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 SLC34A2O95436 690 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 CAPN2P17655 700 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
KRT39-203ENST00000578078 KRT24Q2M2I5 525 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 PLEKHO1Q53GL0 409 aaPredicted RBP8.22□□□□□ -1.09
KRT39-203ENST00000578078 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
KRT39-203ENST00000578078 SLF2Q8IX21 1173 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 GCC1Q96CN9 775 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 TANGO6Q9C0B7 1094 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 LNPKQ9C0E8 428 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 MIS18AQ9NYP9 233 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 PAXBP1Q9Y5B6 917 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
KRT39-203ENST00000578078 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 RGS12O14924 1447 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 TNS3Q68CZ2 1445 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 GOLGA6L6A8MZA4 724 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 APPP05067 770 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 MRPL58Q14197 206 aaKnown RBP8.21□□□□□ -1.09
KRT39-203ENST00000578078 SWI5Q1ZZU3 235 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 GRIPAP1Q4V328 841 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 AMOTQ4VCS5 1084 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 RPAINQ86UA6 219 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 ANKRD24Q8TF21 1146 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 TSC1Q92574 1164 aa8.21□□□□□ -1.09
KRT39-203ENST00000578078 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.09
KRT39-203ENST00000578078 SIPA1L3O60292 1781 aaPredicted RBP8.21□□□□□ -1.1
KRT39-203ENST00000578078 SMTNL1A8MU46 457 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 TRIM6-TRIM34B2RNG4 842 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 KIF1CO43896 1103 aaKnown RBP8.21□□□□□ -1.1
KRT39-203ENST00000578078 SKIP12755 728 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 U2AF2P26368 475 aaKnown RBP eCLIP8.21□□□□□ -1.1
KRT39-203ENST00000578078 CYP2C19P33261 490 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 HSPA2P54652 639 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 NUCB1Q02818 461 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 MTMR2Q13614 643 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 CCDC30Q5VVM6 783 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 LARP1Q6PKG0 1096 aaKnown RBP8.21□□□□□ -1.1
KRT39-203ENST00000578078 RASSF4Q9H2L5 321 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 MKRN1Q9UHC7 482 aaKnown RBP8.21□□□□□ -1.1
KRT39-203ENST00000578078 LMTK3Q96Q04 1460 aa8.21□□□□□ -1.1
KRT39-203ENST00000578078 CEMIPQ8WUJ3 1361 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 COL18A1P39060 1754 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 PXDNQ92626 1479 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 MAPK1P28482 360 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 CCT4P50991 539 aaKnown RBP8.2□□□□□ -1.1
KRT39-203ENST00000578078 RAD51AP2Q09MP3 1159 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 NR1H3Q13133 447 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 NR6A1Q15406 480 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 BMP2KLQ5H9B9 411 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 C1orf141Q5JVX7 400 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 ZNF530Q6P9A1 599 aaPredicted RBP8.2□□□□□ -1.1
KRT39-203ENST00000578078 MNS1Q8NEH6 495 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 IL17REQ8NFR9 667 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 KIF18AQ8NI77 898 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 MICAL1Q8TDZ2 1067 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 LRRC59Q96AG4 307 aaKnown RBP8.2□□□□□ -1.1
KRT39-203ENST00000578078 PSMD1Q99460 953 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 TSPY26PQ9H489 355 aa8.2□□□□□ -1.1
KRT39-203ENST00000578078 PXDNLA1KZ92 1463 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 SCN11AQ9UI33 1791 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 H3BRB1 525 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 RASA1P20936 1047 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 MCCP23508 829 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 TNNT3P45378 269 aaPredicted RBP8.19□□□□□ -1.1
KRT39-203ENST00000578078 TEFQ10587 303 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 RABEP1Q15276 862 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 C9orf131Q5VYM1 1079 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 ICE2Q659A1 982 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 CHD1LQ86WJ1 897 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 ANKMY2Q8IV38 441 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 DEPDC4Q8N2C3 294 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 GOLGA6L1Q8N7Z2 621 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 ZNF397Q8NF99 534 aaPredicted RBP8.19□□□□□ -1.1
KRT39-203ENST00000578078 ZNF592Q92610 1267 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 TUT1Q9H6E5 874 aaKnown RBP8.19□□□□□ -1.1
KRT39-203ENST00000578078 DCTN4Q9UJW0 460 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 ADAMTS7Q9UKP4 1686 aa8.19□□□□□ -1.1
KRT39-203ENST00000578078 TLDC2A0PJX2 215 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 PPP1R3GB7ZBB8 358 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 ICMTO60725 284 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 NOP2P46087 812 aaKnown RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 NCBP1Q09161 790 aaKnown RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 EAPPQ56P03 285 aaPredicted RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 ZSCAN29Q8IWY8 852 aaPredicted RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 TXLNBQ8N3L3 684 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 KIF1BPQ96EK5 621 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 CWC15Q9P013 229 aaKnown RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms