RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 TCP11L1Q9NUJ3 509 aa11.85□□□□□ -0.51
PTPRM-205ENST00000577827 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
PTPRM-205ENST00000577827 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
PTPRM-205ENST00000577827 TRPM2O94759 1503 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 FOXO3O43524 673 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 KRT86O43790 486 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 UBA7P41226 1012 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 CTDP1Q9Y5B0 961 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-205ENST00000577827 PPP1R12BO60237 982 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-205ENST00000577827 KIF5BP33176 963 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 GTF3C6Q969F1 213 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 TEX13AQ9BXU3 409 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-205ENST00000577827 ZHX3Q9H4I2 956 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 SNRKQ9NRH2 765 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 RSPH14Q9UHP6 348 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 GTF2A1P52655 376 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-205ENST00000577827 WTAPQ15007 396 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 ZFYVE27Q5T4F4 411 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
PTPRM-205ENST00000577827 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.51
PTPRM-205ENST00000577827 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.51
PTPRM-205ENST00000577827 SSBP05455 408 aaKnown RBP eCLIP11.83□□□□□ -0.51
PTPRM-205ENST00000577827 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.51
PTPRM-205ENST00000577827 DMTNQ08495 405 aa11.83□□□□□ -0.51
PTPRM-205ENST00000577827 TDRD12Q587J7 1177 aaKnown RBP11.83□□□□□ -0.51
PTPRM-205ENST00000577827 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 TRIM21P19474 475 aaKnown RBP11.83□□□□□ -0.52
PTPRM-205ENST00000577827 TMEM266Q2M3C6 531 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 RNF187Q5TA31 235 aaPredicted RBP11.83□□□□□ -0.52
PTPRM-205ENST00000577827 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 SBNO1A3KN83 1393 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 EBAG9O00559 213 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 RANBP6O60518 1105 aaKnown RBP11.83□□□□□ -0.52
PTPRM-205ENST00000577827 FANCCQ00597 558 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 RTN1Q16799 776 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 TAX1BP1Q86VP1 789 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
PTPRM-205ENST00000577827 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 VPS18Q9P253 973 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
PTPRM-205ENST00000577827 MNAT1P51948 309 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 CAVIN4Q5BKX8 364 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 TRIM47Q96LD4 638 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 LRRC27Q9C0I9 530 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 PALD1Q9ULE6 856 aa11.83□□□□□ -0.52
PTPRM-205ENST00000577827 AKR1B15C9JRZ8 316 aaPredicted RBP11.82□□□□□ -0.52
PTPRM-205ENST00000577827 TACC1O75410 805 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 LIG1P18858 919 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 FAM173BQ6P4H8 233 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPRM-205ENST00000577827 SEC63Q9UGP8 760 aaKnown RBP11.82□□□□□ -0.52
PTPRM-205ENST00000577827 PSMA7O14818 248 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 AKR1B10O60218 316 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 NLRP12P59046 1061 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 IKQ13123 557 aaPredicted RBP11.82□□□□□ -0.52
PTPRM-205ENST00000577827 ANO1Q5XXA6 986 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 TNRQ92752 1358 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 A6NNZ2 444 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 CDC25BP30305 580 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 IFI16Q16666 785 aaKnown RBP11.82□□□□□ -0.52
PTPRM-205ENST00000577827 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 CCDC144CPQ8IYA2 1237 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 CALML4Q96GE6 196 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
PTPRM-205ENST00000577827 TTF2Q9UNY4 1162 aaKnown RBP11.82□□□□□ -0.52
PTPRM-205ENST00000577827 TRIM14Q14142 442 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 HLTFQ14527 1009 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 TTC31Q49AM3 519 aaPredicted RBP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 GOLGA6L10A0A0M3HER8 536 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 SEPT7Q16181 437 aaKnown RBP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 ME3Q16798 604 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 CWF19L2Q2TBE0 894 aaKnown RBP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 RAB11FIP4Q86YS3 637 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 MLKLQ8NB16 471 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 TDRD7Q8NHU6 1098 aaKnown RBP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 GCOM1H8Y6P7 765 aaPredicted RBP11.81□□□□□ -0.52
PTPRM-205ENST00000577827 MYZAPP0CAP1 466 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 KIF5AQ12840 1032 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
PTPRM-205ENST00000577827 KARSQ15046 597 aaKnown RBP11.8□□□□□ -0.52
PTPRM-205ENST00000577827 ENOX2Q16206 610 aaKnown RBP11.8□□□□□ -0.52
PTPRM-205ENST00000577827 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
PTPRM-205ENST00000577827 ESR2Q92731 530 aa11.8□□□□□ -0.52
PTPRM-205ENST00000577827 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
PTPRM-205ENST00000577827 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
PTPRM-205ENST00000577827 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms