RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 TTLL7Q6ZT98 887 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 MORC1Q86VD1 984 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 GMLQ99445 158 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 UBE2OQ9C0C9 1292 aaKnown RBP9.74□□□□□ -0.85
RAB40B-210ENST00000576148 ZBTB3Q9H5J0 574 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 ZMYND8Q9ULU4 1186 aaPredicted RBP9.74□□□□□ -0.85
RAB40B-210ENST00000576148 FZD1Q9UP38 647 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 DUOX1Q9NRD9 1551 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 SGPL1O95470 568 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
RAB40B-210ENST00000576148 CAPN2P17655 700 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 HOXD10P28358 340 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 MAGEA10P43363 369 aaPredicted RBP9.73□□□□□ -0.85
RAB40B-210ENST00000576148 GPSM2P81274 684 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 MAP3K11Q16584 847 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 TJAP1Q5JTD0 557 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 APOBEC3FQ8IUX4 373 aaKnown RBP9.73□□□□□ -0.85
RAB40B-210ENST00000576148 OGFOD1Q8N543 542 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 RAET1EQ8TD07 263 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 TRIM47Q96LD4 638 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 ARHGAP39Q9C0H5 1083 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 LAMB4A4D0S4 1761 aa9.73□□□□□ -0.85
RAB40B-210ENST00000576148 WNT10BO00744 389 aa9.72□□□□□ -0.85
RAB40B-210ENST00000576148 TFRCP02786 760 aaKnown RBP9.72□□□□□ -0.85
RAB40B-210ENST00000576148 ZNF697Q5TEC3 545 aa9.72□□□□□ -0.85
RAB40B-210ENST00000576148 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
RAB40B-210ENST00000576148 C7orf61Q8IZ16 206 aa9.72□□□□□ -0.85
RAB40B-210ENST00000576148 TBC1D16Q8TBP0 767 aa9.72□□□□□ -0.85
RAB40B-210ENST00000576148 CDX2Q99626 313 aaPredicted RBP9.72□□□□□ -0.85
RAB40B-210ENST00000576148 RIPOR2Q9Y4F9 1068 aa9.72□□□□□ -0.85
RAB40B-210ENST00000576148 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
RAB40B-210ENST00000576148 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
RAB40B-210ENST00000576148 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
RAB40B-210ENST00000576148 GJA5P36382 358 aa9.71□□□□□ -0.86
RAB40B-210ENST00000576148 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
RAB40B-210ENST00000576148 SRRDQ9UH36 339 aa9.71□□□□□ -0.86
RAB40B-210ENST00000576148 RRP7AQ9Y3A4 280 aaKnown RBP9.71□□□□□ -0.86
RAB40B-210ENST00000576148 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
RAB40B-210ENST00000576148 MUC3AQ02505 3323 aa9.7□□□□□ -0.86
RAB40B-210ENST00000576148 SYN1P17600 705 aa9.7□□□□□ -0.86
RAB40B-210ENST00000576148 NECAB2Q7Z6G3 386 aa9.7□□□□□ -0.86
RAB40B-210ENST00000576148 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
RAB40B-210ENST00000576148 PAWRQ96IZ0 340 aaKnown RBP9.7□□□□□ -0.86
RAB40B-210ENST00000576148 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
RAB40B-210ENST00000576148 CCL15-CCL14A0A0B4J2E2 113 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 TLR2O60603 784 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 SASH1O94885 1247 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 MYL6BP14649 208 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 IREB2P48200 963 aaKnown RBP9.69□□□□□ -0.86
RAB40B-210ENST00000576148 CCL15Q16663 113 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 SUPT20HL1Q3ZLR7 823 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 ANKRD13AQ8IZ07 590 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
RAB40B-210ENST00000576148 BRI3BPQ8WY22 251 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 MS4A4AQ96JQ5 239 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 UNC93B1Q9H1C4 597 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 DEFB129Q9H1M3 183 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 HCN4Q9Y3Q4 1203 aa9.69□□□□□ -0.86
RAB40B-210ENST00000576148 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
RAB40B-210ENST00000576148 PSMC4P43686 418 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 MMP14P50281 582 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 GTF2A2P52657 109 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 FAM43AQ8N2R8 423 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 CELF1Q92879 486 aaKnown RBP9.68□□□□□ -0.86
RAB40B-210ENST00000576148 OPTNQ96CV9 577 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 PIEZO1Q92508 2521 aa9.68□□□□□ -0.86
RAB40B-210ENST00000576148 CACNA1AO00555 2505 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 PRUNE2Q8WUY3 3088 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 FAM205AQ6ZU69 1335 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 MYPNQ86TC9 1320 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 DIAPH1O60610 1272 aaKnown RBP9.67□□□□□ -0.86
RAB40B-210ENST00000576148 UFL1O94874 794 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 SLAIN1Q8ND83 568 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 DEFB118Q96PH6 123 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 C1QTNF1Q9BXJ1 281 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 TRMT112Q9UI30 125 aaKnown RBP9.67□□□□□ -0.86
RAB40B-210ENST00000576148 GGA1Q9UJY5 639 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 EYSQ5T1H1 3165 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 TAF1P21675 1872 aa9.67□□□□□ -0.86
RAB40B-210ENST00000576148 DDX60Q8IY21 1712 aaKnown RBP9.67□□□□□ -0.86
RAB40B-210ENST00000576148 NUP98P52948 1817 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
RAB40B-210ENST00000576148 SH3TC1Q8TE82 1336 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 OSBPP22059 807 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 MYLIPQ8WY64 445 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 SEMA6BQ9H3T3 888 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 ELP3Q9H9T3 547 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 PODXL2Q9NZ53 605 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 PPP2R3BQ9Y5P8 575 aa9.66□□□□□ -0.86
RAB40B-210ENST00000576148 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
RAB40B-210ENST00000576148 MYO3BQ8WXR4 1341 aa9.65□□□□□ -0.86
RAB40B-210ENST00000576148 SCN9AQ15858 1988 aa9.65□□□□□ -0.86
RAB40B-210ENST00000576148 USP2O75604 605 aaPredicted RBP9.65□□□□□ -0.86
RAB40B-210ENST00000576148 FOSL2P15408 326 aa9.65□□□□□ -0.86
RAB40B-210ENST00000576148 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
RAB40B-210ENST00000576148 NLRP10Q86W26 655 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms