RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 DNAJC14Q6Y2X3 702 aaPredicted RBP6.11□□□□□ -1.43
CDC27-218ENST00000575830 NCAPG2Q86XI2 1143 aa6.11□□□□□ -1.43
CDC27-218ENST00000575830 SPACA7Q96KW9 195 aa6.11□□□□□ -1.43
CDC27-218ENST00000575830 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
CDC27-218ENST00000575830 RBSNQ9H1K0 784 aa6.11□□□□□ -1.43
CDC27-218ENST00000575830 BIN2Q9UBW5 565 aaPredicted RBP6.11□□□□□ -1.43
CDC27-218ENST00000575830 TRIM33Q9UPN9 1127 aa6.11□□□□□ -1.43
CDC27-218ENST00000575830 A0A1W2PP55 124 aa6.1□□□□□ -1.43
CDC27-218ENST00000575830 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
CDC27-218ENST00000575830 SMNDC1O75940 238 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDC27-218ENST00000575830 MAPK1P28482 360 aa6.1□□□□□ -1.43
CDC27-218ENST00000575830 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
CDC27-218ENST00000575830 FBXO11Q86XK2 927 aa6.1□□□□□ -1.43
CDC27-218ENST00000575830 DMRTC2Q8IXT2 367 aaPredicted RBP6.1□□□□□ -1.43
CDC27-218ENST00000575830 FMR1NBQ8N0W7 255 aaPredicted RBP6.1□□□□□ -1.43
CDC27-218ENST00000575830 ZKSCAN3Q9BRR0 538 aa6.1□□□□□ -1.43
CDC27-218ENST00000575830 SRA1Q9HD15 236 aaKnown RBP6.1□□□□□ -1.43
CDC27-218ENST00000575830 SOX13Q9UN79 622 aa6.1□□□□□ -1.43
CDC27-218ENST00000575830 PDE2AO00408 941 aaPredicted RBP6.09□□□□□ -1.43
CDC27-218ENST00000575830 DLL1O00548 723 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 CEP135Q66GS9 1140 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 CCNJLQ8IV13 435 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 HHIPQ96QV1 700 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 TCF12Q99081 682 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 OSMRQ99650 979 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 MUC3BQ9H195 1237 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 LATS2Q9NRM7 1088 aa6.09□□□□□ -1.43
CDC27-218ENST00000575830 POLR3DP05423 398 aaPredicted RBP6.08□□□□□ -1.44
CDC27-218ENST00000575830 ELNP15502 786 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 PLCB3Q01970 1234 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 TRIM28Q13263 835 aaKnown RBP6.08□□□□□ -1.44
CDC27-218ENST00000575830 SETDB1Q15047 1291 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 WFDC8Q8IUA0 241 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 MAP4K3Q8IVH8 894 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 ZSCAN29Q8IWY8 852 aaPredicted RBP6.08□□□□□ -1.44
CDC27-218ENST00000575830 IL22RA1Q8N6P7 574 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 CCDC74AQ96AQ1 378 aa6.08□□□□□ -1.44
CDC27-218ENST00000575830 TRPA1O75762 1119 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 SELPP16109 830 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 CDC27P30260 824 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 PLA2G4EQ3MJ16 856 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 PRPF40BQ6NWY9 871 aaKnown RBP6.07□□□□□ -1.44
CDC27-218ENST00000575830 VN1R5Q7Z5H4 357 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 GLIS3Q8NEA6 775 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 WNT8BQ93098 351 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 LENG1Q96BZ8 264 aaPredicted RBP6.07□□□□□ -1.44
CDC27-218ENST00000575830 PPME1Q9Y570 386 aa6.07□□□□□ -1.44
CDC27-218ENST00000575830 PTPRAP18433 802 aa6.06□□□□□ -1.44
CDC27-218ENST00000575830 EPHA1P21709 976 aa6.06□□□□□ -1.44
CDC27-218ENST00000575830 PTPN12Q05209 780 aaKnown RBP6.06□□□□□ -1.44
CDC27-218ENST00000575830 PRRT3Q5FWE3 981 aa6.06□□□□□ -1.44
CDC27-218ENST00000575830 BSNDQ8WZ55 320 aa6.06□□□□□ -1.44
CDC27-218ENST00000575830 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 ITPKAP23677 461 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 CHRNA4P43681 627 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 RAC1P63000 192 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 GDF6Q6KF10 455 aaPredicted RBP6.05□□□□□ -1.44
CDC27-218ENST00000575830 NPAS4Q8IUM7 802 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 GALNT11Q8NCW6 608 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 FBF1Q8TES7 1133 aa6.05□□□□□ -1.44
CDC27-218ENST00000575830 GZF1Q9H116 711 aaPredicted RBP6.05□□□□□ -1.44
CDC27-218ENST00000575830 C1QTNF9BB2RNN3 333 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 H3BRJ5 948 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 IGHA1P01876 353 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 PROCP04070 461 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 GRIA4P48058 902 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 ADGRE1Q14246 886 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 GRIK4Q16099 956 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 IGF2-ASQ6U949 168 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 TMEM130Q8N3G9 435 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 TMC1Q8TDI8 760 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 EPS8L3Q8TE67 593 aaKnown RBP6.04□□□□□ -1.44
CDC27-218ENST00000575830 SOX17Q9H6I2 414 aaPredicted RBP6.04□□□□□ -1.44
CDC27-218ENST00000575830 ABCB6Q9NP58 842 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 OSGEPQ9NPF4 335 aa6.04□□□□□ -1.44
CDC27-218ENST00000575830 SH2B1Q9NRF2 756 aaPredicted RBP6.04□□□□□ -1.44
CDC27-218ENST00000575830 C9orf172C9J069 976 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 FSCN2O14926 492 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 P4HBP07237 508 aaKnown RBP6.03□□□□□ -1.44
CDC27-218ENST00000575830 ERCC3P19447 782 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 PIP4K2BP78356 416 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 KLHL23Q8NBE8 558 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 ANKRD24Q8TF21 1146 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 NACC1Q96RE7 527 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 LACRTQ9GZZ8 138 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 LIN7BQ9HAP6 207 aa6.03□□□□□ -1.44
CDC27-218ENST00000575830 A0A096LPE4 126 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 PNMA6FA0A0J9YX94 578 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 A0A1W2PPZ6 126 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 ANKRD33BA6NCL7 494 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 METTL12A8MUP2 240 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 LINC01387J3KSC0 135 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 SOX1O00570 391 aaPredicted RBP6.02□□□□□ -1.45
CDC27-218ENST00000575830 GRM2Q14416 872 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 RPS26P11Q5JNZ5 115 aaPredicted RBP6.02□□□□□ -1.45
CDC27-218ENST00000575830 ALG1LQ6GMV1 187 aa6.02□□□□□ -1.45
CDC27-218ENST00000575830 Q6ZS46 218 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms