RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 KLRK1P26718 216 aa17.26■□□□□ 0.35
RPAIN-217ENST00000575711 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
RPAIN-217ENST00000575711 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
RPAIN-217ENST00000575711 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
RPAIN-217ENST00000575711 APBB1O00213 710 aa17.25■□□□□ 0.35
RPAIN-217ENST00000575711 KIF1BPQ96EK5 621 aa17.25■□□□□ 0.35
RPAIN-217ENST00000575711 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-217ENST00000575711 DCTPP1Q9H773 170 aa17.25■□□□□ 0.35
RPAIN-217ENST00000575711 DBNDD1Q9H9R9 158 aa17.25■□□□□ 0.35
RPAIN-217ENST00000575711 IRS2Q9Y4H2 1338 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 A0A1B0GUL7 405 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 DOK7Q18PE1 504 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 GPR108Q9NPR9 543 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
RPAIN-217ENST00000575711 COL4A5P29400 1685 aa17.23■□□□□ 0.35
RPAIN-217ENST00000575711 SBF1O95248 1867 aa17.23■□□□□ 0.35
RPAIN-217ENST00000575711 ECE2O60344 883 aa17.23■□□□□ 0.35
RPAIN-217ENST00000575711 TNNI3KQ59H18 835 aa17.23■□□□□ 0.35
RPAIN-217ENST00000575711 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
RPAIN-217ENST00000575711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-217ENST00000575711 FPGT-TNNI3KV9GXZ4 949 aa17.23■□□□□ 0.35
RPAIN-217ENST00000575711 ZNF609O15014 1411 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 FZD9O00144 591 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
RPAIN-217ENST00000575711 GYG1P46976 350 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
RPAIN-217ENST00000575711 TIMM10P62072 90 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 PODNQ7Z5L7 613 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 NEUROD6Q96NK8 337 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 LRRCC1Q9C099 1032 aa17.22■□□□□ 0.35
RPAIN-217ENST00000575711 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
RPAIN-217ENST00000575711 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-217ENST00000575711 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
RPAIN-217ENST00000575711 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
RPAIN-217ENST00000575711 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
RPAIN-217ENST00000575711 DICER1Q9UPY3 1922 aaKnown RBP17.2■□□□□ 0.34
RPAIN-217ENST00000575711 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
RPAIN-217ENST00000575711 ADORA1P30542 326 aa17.2■□□□□ 0.34
RPAIN-217ENST00000575711 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
RPAIN-217ENST00000575711 XAGE2Q96GT9 111 aa17.2■□□□□ 0.34
RPAIN-217ENST00000575711 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
RPAIN-217ENST00000575711 CHD4Q14839 1912 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 IGHDP01880 384 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 BCAMP50895 628 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 GORABQ5T7V8 394 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 AACSQ86V21 672 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-217ENST00000575711 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-217ENST00000575711 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
RPAIN-217ENST00000575711 FRAT2O75474 233 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-217ENST00000575711 RAD17O75943 681 aa17.18■□□□□ 0.34
RPAIN-217ENST00000575711 IL1R1P14778 569 aa17.18■□□□□ 0.34
RPAIN-217ENST00000575711 CXCL9Q07325 125 aa17.18■□□□□ 0.34
RPAIN-217ENST00000575711 TNIP1Q15025 636 aa17.18■□□□□ 0.34
RPAIN-217ENST00000575711 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
RPAIN-217ENST00000575711 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
RPAIN-217ENST00000575711 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-217ENST00000575711 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
RPAIN-217ENST00000575711 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
RPAIN-217ENST00000575711 TDRD7Q8NHU6 1098 aaKnown RBP17.17■□□□□ 0.34
RPAIN-217ENST00000575711 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
RPAIN-217ENST00000575711 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
RPAIN-217ENST00000575711 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-217ENST00000575711 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
RPAIN-217ENST00000575711 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 GLTPD2A6NH11 291 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 YY1P25490 414 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 PHKA1P46020 1223 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 SMC5Q8IY18 1101 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 GPC2Q8N158 579 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 KCNQ5Q9NR82 932 aa17.16■□□□□ 0.34
RPAIN-217ENST00000575711 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
RPAIN-217ENST00000575711 IQSEC3Q9UPP2 1182 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-217ENST00000575711 PSMD14O00487 310 aa17.15■□□□□ 0.34
RPAIN-217ENST00000575711 DDNO94850 711 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-217ENST00000575711 GTF2IP78347 998 aa17.15■□□□□ 0.34
RPAIN-217ENST00000575711 TTC39AQ5SRH9 613 aa17.15■□□□□ 0.34
RPAIN-217ENST00000575711 STRIP1Q5VSL9 837 aa17.15■□□□□ 0.34
RPAIN-217ENST00000575711 TTLL5Q6EMB2 1281 aa17.15■□□□□ 0.34
RPAIN-217ENST00000575711 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
RPAIN-217ENST00000575711 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
RPAIN-217ENST00000575711 SEMA3EO15041 775 aa17.14■□□□□ 0.33
RPAIN-217ENST00000575711 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
RPAIN-217ENST00000575711 ZBTB22O15209 634 aa17.13■□□□□ 0.33
RPAIN-217ENST00000575711 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
RPAIN-217ENST00000575711 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms