RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
USP6-206ENST00000575709 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 A6NNZ2 444 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 TUBB8Q3ZCM7 444 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
USP6-206ENST00000575709 AOPEPQ8N6M6 819 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
USP6-206ENST00000575709 HMGB1P1B2RPK0 211 aaPredicted RBP11.87□□□□□ -0.51
USP6-206ENST00000575709 POLR3DP05423 398 aaPredicted RBP11.87□□□□□ -0.51
USP6-206ENST00000575709 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP6-206ENST00000575709 TRIM55Q9BYV6 548 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 GAS8O95995 478 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 SERPINB6P35237 376 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 ITIH3Q06033 890 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 HAUS7Q99871 368 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 ATP6V0A2Q9Y487 856 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 LIG3P49916 1009 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 NLRP5P59047 1200 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 CCDC26Q8TAB7 109 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 A0A087WZG4 1122 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 GOLGA6BA6NDN3 693 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 STX6O43752 255 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 CAVIN2O95810 425 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 ATP6V1E1P36543 226 aa11.87□□□□□ -0.51
USP6-206ENST00000575709 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
USP6-206ENST00000575709 MCM7P33993 719 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 TTF1Q15361 905 aaPredicted RBP11.86□□□□□ -0.51
USP6-206ENST00000575709 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 HAUS8Q9BT25 410 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 ZBBXA8MT70 800 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 SLC4A1P02730 911 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 MAP3K21Q5TCX8 1036 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
USP6-206ENST00000575709 TUBB4AP04350 444 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
USP6-206ENST00000575709 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 BCAP29Q9UHQ4 241 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 AFMP43652 599 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 DPH6Q7L8W6 267 aa11.86□□□□□ -0.51
USP6-206ENST00000575709 BIRC2Q13490 618 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 SLC24A3Q9HC58 644 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 EEF1DP29692 281 aaKnown RBP11.85□□□□□ -0.51
USP6-206ENST00000575709 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 IRAK4Q9NWZ3 460 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 ELF2Q15723 593 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 STXBP4Q6ZWJ1 553 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 PMS1P54277 932 aaKnown RBP11.85□□□□□ -0.51
USP6-206ENST00000575709 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
USP6-206ENST00000575709 RRAGBQ5VZM2 374 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 SLC12A7Q9Y666 1083 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 MINDY4BA8MYZ0 360 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 TUBBP07437 444 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 GIPC1O14908 333 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 KLHL40Q2TBA0 621 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 ARHGEF9O43307 516 aa11.85□□□□□ -0.51
USP6-206ENST00000575709 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
USP6-206ENST00000575709 TRIM60Q495X7 471 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 CACYBPQ9HB71 228 aaKnown RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 CTTNBP2NLQ9P2B4 639 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 SYKP43405 635 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 CCT4P50991 539 aaKnown RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 AEBP2Q6ZN18 517 aaPredicted RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 CCDC194A0A1B0GVG4 234 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 IL1RL1Q01638 556 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 C16orf87Q6PH81 154 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 RMND1Q9NWS8 449 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 RIOK3O14730 519 aaKnown RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 PPP1R12AO14974 1030 aaPredicted RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 UBXN1Q04323 297 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 EXOSC9Q06265 439 aaKnown RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 IL1RAPL2Q9NP60 686 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 IDH1O75874 414 aaKnown RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
USP6-206ENST00000575709 ANKRD20A3Q5VUR7 823 aa11.84□□□□□ -0.51
USP6-206ENST00000575709 SLC4A2P04920 1241 aa11.83□□□□□ -0.51
USP6-206ENST00000575709 SEL1L2Q5TEA6 688 aa11.83□□□□□ -0.51
USP6-206ENST00000575709 CCDC42Q96M95 316 aa11.83□□□□□ -0.51
USP6-206ENST00000575709 UTP14AQ9BVJ6 771 aaKnown RBP11.83□□□□□ -0.51
USP6-206ENST00000575709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.83□□□□□ -0.51
USP6-206ENST00000575709 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
USP6-206ENST00000575709 CDR2Q01850 454 aa11.83□□□□□ -0.52
USP6-206ENST00000575709 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
USP6-206ENST00000575709 CUL5Q93034 780 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms