RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 CCDC173Q0VFZ6 552 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 PKP1Q13835 747 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 TXNRD1Q16881 649 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 ISM2Q6H9L7 571 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 DEFB132Q7Z7B7 95 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 NUP133Q8WUM0 1156 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 CGNQ9P2M7 1197 aaKnown RBP8.9□□□□□ -0.98
RPA1-207ENST00000574049 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 ERFEQ4G0M1 354 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 TBC1D9BQ66K14 1250 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 TPTE2Q6XPS3 522 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 CHST3Q7LGC8 479 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 CCDC144CPQ8IYA2 1237 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 ZBTB38Q8NAP3 1195 aaPredicted RBP8.9□□□□□ -0.98
RPA1-207ENST00000574049 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 PHRF1Q9P1Y6 1649 aaKnown RBP8.9□□□□□ -0.99
RPA1-207ENST00000574049 SASH1O94885 1247 aa8.9□□□□□ -0.99
RPA1-207ENST00000574049 CCDC158Q5M9N0 1113 aa8.9□□□□□ -0.99
RPA1-207ENST00000574049 CPLX2Q6PUV4 134 aaKnown RBP8.9□□□□□ -0.99
RPA1-207ENST00000574049 SASS6Q6UVJ0 657 aa8.9□□□□□ -0.99
RPA1-207ENST00000574049 TMX1Q9H3N1 280 aa8.9□□□□□ -0.99
RPA1-207ENST00000574049 TNS2Q63HR2 1409 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 H7C1W4 665 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 PTPN12Q05209 780 aaKnown RBP8.89□□□□□ -0.99
RPA1-207ENST00000574049 TRIM29Q14134 588 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 BMP2KLQ5H9B9 411 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 FAM173BQ6P4H8 233 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 HOMER1Q86YM7 354 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 KIF3AQ9Y496 699 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.89□□□□□ -0.99
RPA1-207ENST00000574049 EYA2O00167 538 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 PDE8AO60658 829 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 GLRX3O76003 335 aaKnown RBP8.89□□□□□ -0.99
RPA1-207ENST00000574049 BAG4O95429 457 aaKnown RBP8.89□□□□□ -0.99
RPA1-207ENST00000574049 IFIT1P09914 478 aaKnown RBP8.89□□□□□ -0.99
RPA1-207ENST00000574049 ME1P48163 572 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 CERS3Q8IU89 383 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 ANKIB1Q9P2G1 1089 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 PCCAP05165 728 aaPredicted RBP8.89□□□□□ -0.99
RPA1-207ENST00000574049 CCDC152Q4G0S7 254 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 HSP90AA4PQ58FG1 418 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 ZNF622Q969S3 477 aaKnown RBP eCLIP8.89□□□□□ -0.99
RPA1-207ENST00000574049 LRRC4BQ9NT99 713 aa8.89□□□□□ -0.99
RPA1-207ENST00000574049 LRP6O75581 1613 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 RPS6KA4O75676 772 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 TPD52L1Q16890 204 aaPredicted RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 CCDC73Q6ZRK6 1079 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 TTC12Q9H892 705 aaPredicted RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 A0A1B0GUL7 405 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 VGLL3A8MV65 326 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 ATP2B2Q01814 1243 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 ATP2B3Q16720 1220 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 ISCA1Q9BUE6 129 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 COL15A1P39059 1388 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 MARF1Q9Y4F3 1742 aaKnown RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 IL15P40933 162 aaPredicted RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 CTSWP56202 376 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 TNNI3KQ59H18 835 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 RPGRQ92834 1020 aaKnown RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 TMX4Q9H1E5 349 aaPredicted RBP8.88□□□□□ -0.99
RPA1-207ENST00000574049 FPGT-TNNI3KV9GXZ4 949 aa8.88□□□□□ -0.99
RPA1-207ENST00000574049 STK25O00506 426 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 SEMA3EO15041 775 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 CAMTA2O94983 1202 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 ADORA1P30542 326 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 LRP10Q7Z4F1 713 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 MTERF4Q7Z6M4 381 aaKnown RBP8.87□□□□□ -0.99
RPA1-207ENST00000574049 ANKRD18AQ8IVF6 992 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 TTLL11Q8NHH1 800 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 TSPY26PQ9H489 355 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 IBTKQ9P2D0 1353 aaPredicted RBP8.87□□□□□ -0.99
RPA1-207ENST00000574049 POLA2Q14181 598 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 NSFL1CQ9UNZ2 370 aaKnown RBP8.87□□□□□ -0.99
RPA1-207ENST00000574049 UBN2Q6ZU65 1347 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 SLIT2O94813 1529 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 MINDY4BA8MYZ0 360 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 CD2BP2O95400 341 aaKnown RBP8.87□□□□□ -0.99
RPA1-207ENST00000574049 PSMA5P28066 241 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 FOXO4P98177 505 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 SLFNL1Q499Z3 407 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 PARP10Q53GL7 1025 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 PI16Q6UXB8 463 aa8.87□□□□□ -0.99
RPA1-207ENST00000574049 ATP10DQ9P241 1426 aa8.86□□□□□ -0.99
RPA1-207ENST00000574049 ERICH4A6NGS2 130 aa8.86□□□□□ -0.99
RPA1-207ENST00000574049 AMIGO3Q86WK7 504 aa8.86□□□□□ -0.99
RPA1-207ENST00000574049 PDILTQ8N807 584 aa8.86□□□□□ -0.99
RPA1-207ENST00000574049 KRI1Q8N9T8 703 aaKnown RBP8.86□□□□□ -0.99
RPA1-207ENST00000574049 TRMT1Q9NXH9 659 aaKnown RBP8.86□□□□□ -0.99
RPA1-207ENST00000574049 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.86□□□□□ -0.99
RPA1-207ENST00000574049 V9GYY5 206 aaPredicted RBP8.86□□□□□ -0.99
RPA1-207ENST00000574049 CDC5LQ99459 802 aaKnown RBP8.86□□□□□ -0.99
RPA1-207ENST00000574049 DBNLQ9UJU6 430 aaKnown RBP8.86□□□□□ -0.99
RPA1-207ENST00000574049 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.86□□□□□ -0.99
RPA1-207ENST00000574049 AHDC1Q5TGY3 1603 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms