RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 MCMDC2Q4G0Z9 681 aa19■□□□□ 0.63
USP43-204ENST00000573955 PDE8AO60658 829 aa19■□□□□ 0.63
USP43-204ENST00000573955 SCARF1Q14162 830 aa19■□□□□ 0.63
USP43-204ENST00000573955 CCDC158Q5M9N0 1113 aa19■□□□□ 0.63
USP43-204ENST00000573955 INTS4Q96HW7 963 aaKnown RBP19■□□□□ 0.63
USP43-204ENST00000573955 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 CCDC83Q8IWF9 413 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 HELBQ8NG08 1087 aaPredicted RBP18.99■□□□□ 0.63
USP43-204ENST00000573955 KCNB2Q92953 911 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 AKAP2Q9Y2D5 859 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 ANKRD36CQ5JPF3 1778 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 VPS53Q5VIR6 699 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 SEPT12Q8IYM1 358 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
USP43-204ENST00000573955 RIPOR2Q9Y4F9 1068 aa18.99■□□□□ 0.63
USP43-204ENST00000573955 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
USP43-204ENST00000573955 ATP2B3Q16720 1220 aa18.98■□□□□ 0.63
USP43-204ENST00000573955 RIC1Q4ADV7 1423 aa18.98■□□□□ 0.63
USP43-204ENST00000573955 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
USP43-204ENST00000573955 NIP7Q9Y221 180 aaKnown RBP eCLIP18.98■□□□□ 0.63
USP43-204ENST00000573955 IRX3P78415 501 aaPredicted RBP18.97■□□□□ 0.63
USP43-204ENST00000573955 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
USP43-204ENST00000573955 LINC00116Q8NCU8 138 aa18.97■□□□□ 0.63
USP43-204ENST00000573955 BLOC1S2Q6QNY1 142 aa18.97■□□□□ 0.63
USP43-204ENST00000573955 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
USP43-204ENST00000573955 TM6SF1Q9BZW5 370 aa18.97■□□□□ 0.63
USP43-204ENST00000573955 DDX49Q9Y6V7 483 aaKnown RBP18.97■□□□□ 0.63
USP43-204ENST00000573955 ZAP70P43403 619 aa18.96■□□□□ 0.63
USP43-204ENST00000573955 SH3TC1Q8TE82 1336 aa18.96■□□□□ 0.63
USP43-204ENST00000573955 SNAP23O00161 211 aa18.96■□□□□ 0.63
USP43-204ENST00000573955 PRPF40AO75400 957 aaKnown RBP18.96■□□□□ 0.63
USP43-204ENST00000573955 UTP14AQ9BVJ6 771 aaKnown RBP18.96■□□□□ 0.63
USP43-204ENST00000573955 SEC31BQ9NQW1 1179 aa18.96■□□□□ 0.63
USP43-204ENST00000573955 FBXO3Q9UK99 471 aa18.96■□□□□ 0.63
USP43-204ENST00000573955 RPAP1Q9BWH6 1393 aaPredicted RBP18.96■□□□□ 0.63
USP43-204ENST00000573955 BRD1O95696 1058 aa18.95■□□□□ 0.62
USP43-204ENST00000573955 PSMA5P28066 241 aa18.95■□□□□ 0.62
USP43-204ENST00000573955 AMIGO3Q86WK7 504 aa18.95■□□□□ 0.62
USP43-204ENST00000573955 SMARCC1Q92922 1105 aaPredicted RBP18.95■□□□□ 0.62
USP43-204ENST00000573955 ME3Q16798 604 aa18.95■□□□□ 0.62
USP43-204ENST00000573955 TPCN1Q9ULQ1 816 aa18.95■□□□□ 0.62
USP43-204ENST00000573955 RFX7Q2KHR2 1363 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 A0A0G2JLW4 131 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 CYP21A2P08686 494 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 MYH3P11055 1940 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 MAST3O60307 1309 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 RNF113AO15541 343 aaKnown RBP18.94■□□□□ 0.62
USP43-204ENST00000573955 WASHC4Q2M389 1173 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 SMC3Q9UQE7 1217 aa18.94■□□□□ 0.62
USP43-204ENST00000573955 M0R2C6 588 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 ZMYM1Q5SVZ6 1142 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 PPP1R9BQ96SB3 815 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 ZBTB22O15209 634 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 RPS6KB1P23443 525 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 STK3Q13188 491 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 USPL1Q5W0Q7 1092 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 LMBRD1Q9NUN5 540 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 HMG20BQ9P0W2 317 aa18.93■□□□□ 0.62
USP43-204ENST00000573955 CGNQ9P2M7 1197 aaKnown RBP18.93■□□□□ 0.62
USP43-204ENST00000573955 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
USP43-204ENST00000573955 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 SKOR2Q2VWA4 1001 aaPredicted RBP18.92■□□□□ 0.62
USP43-204ENST00000573955 CCDC24Q8N4L8 307 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 RGS22Q8NE09 1264 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 OSBP2Q969R2 916 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 LRRC2Q9BYS8 371 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 HELLSQ9NRZ9 838 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 PDE8BO95263 885 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 MCAMP43121 646 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 CBX1P83916 185 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 VGLL2Q8N8G2 317 aa18.92■□□□□ 0.62
USP43-204ENST00000573955 TRPC5Q9UL62 973 aaPredicted RBP18.92■□□□□ 0.62
USP43-204ENST00000573955 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.92■□□□□ 0.62
USP43-204ENST00000573955 PTMSP20962 102 aa18.91■□□□□ 0.62
USP43-204ENST00000573955 GJB2P29033 226 aa18.91■□□□□ 0.62
USP43-204ENST00000573955 MPHOSPH8Q99549 860 aa18.91■□□□□ 0.62
USP43-204ENST00000573955 GDPD2Q9HCC8 539 aa18.91■□□□□ 0.62
USP43-204ENST00000573955 PHF14O94880 888 aa18.9■□□□□ 0.62
USP43-204ENST00000573955 NTSR2O95665 410 aa18.9■□□□□ 0.62
USP43-204ENST00000573955 HSPD1P10809 573 aaKnown RBP18.9■□□□□ 0.62
USP43-204ENST00000573955 PHKA1P46020 1223 aa18.9■□□□□ 0.62
USP43-204ENST00000573955 TOB2Q14106 344 aaPredicted RBP18.9■□□□□ 0.62
USP43-204ENST00000573955 TPRNQ4KMQ1 711 aa18.9■□□□□ 0.62
USP43-204ENST00000573955 NEK1Q96PY6 1258 aa18.9■□□□□ 0.62
USP43-204ENST00000573955 STOX1Q6ZVD7 989 aa18.9■□□□□ 0.62
USP43-204ENST00000573955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
USP43-204ENST00000573955 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
USP43-204ENST00000573955 SYT1P21579 422 aa18.89■□□□□ 0.62
USP43-204ENST00000573955 PARP10Q53GL7 1025 aa18.89■□□□□ 0.62
USP43-204ENST00000573955 TTLL5Q6EMB2 1281 aa18.89■□□□□ 0.62
USP43-204ENST00000573955 ZSCAN31Q96LW9 406 aaPredicted RBP18.89■□□□□ 0.62
USP43-204ENST00000573955 CAVIN1Q6NZI2 390 aaKnown RBP18.89■□□□□ 0.61
USP43-204ENST00000573955 SH2B1Q9NRF2 756 aaPredicted RBP18.89■□□□□ 0.61
USP43-204ENST00000573955 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
USP43-204ENST00000573955 CSPP1Q1MSJ5 1256 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 KLHL40Q2TBA0 621 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 SASS6Q6UVJ0 657 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 GAS2L3Q86XJ1 694 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms