RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 OGFOD1Q8N543 542 aa15.57■□□□□ 0.08
CCDC40-210ENST00000573903 MYO3BQ8WXR4 1341 aa15.57■□□□□ 0.08
CCDC40-210ENST00000573903 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
CCDC40-210ENST00000573903 PAPPA2Q9BXP8 1791 aa15.57■□□□□ 0.08
CCDC40-210ENST00000573903 FAM155AB1AL88 458 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-210ENST00000573903 FKBP1BP68106 108 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 FLIIQ13045 1269 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 MPHOSPH8Q99549 860 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 COA1Q9GZY4 146 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 SAGE1Q9NXZ1 904 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 LEMD3Q9Y2U8 911 aa15.56■□□□□ 0.08
CCDC40-210ENST00000573903 ASTN2O75129 1339 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-210ENST00000573903 H7C1W4 665 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 SLC10A3P09131 477 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 KCNJ4P48050 445 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 KIF23Q02241 960 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-210ENST00000573903 DGKZQ13574 1117 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 GCKRQ14397 625 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 CCDC184Q52MB2 194 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
CCDC40-210ENST00000573903 G2E3Q7L622 706 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 DNAAF4Q8WXU2 420 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 ZIC5Q96T25 663 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 GMLQ99445 158 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 MCOLN1Q9GZU1 580 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 ANKRD2Q9GZV1 360 aa15.55■□□□□ 0.08
CCDC40-210ENST00000573903 FANCIQ9NVI1 1328 aa15.54■□□□□ 0.08
CCDC40-210ENST00000573903 ITGA6P23229 1130 aa15.54■□□□□ 0.08
CCDC40-210ENST00000573903 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
CCDC40-210ENST00000573903 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-210ENST00000573903 PLA2G12BQ9BX93 195 aa15.54■□□□□ 0.08
CCDC40-210ENST00000573903 ZNF804BA4D1E1 1349 aa15.53■□□□□ 0.08
CCDC40-210ENST00000573903 NF2P35240 595 aa15.53■□□□□ 0.08
CCDC40-210ENST00000573903 MMP14P50281 582 aa15.53■□□□□ 0.08
CCDC40-210ENST00000573903 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
CCDC40-210ENST00000573903 LINS1Q8NG48 757 aa15.53■□□□□ 0.08
CCDC40-210ENST00000573903 HDAC9Q9UKV0 1011 aa15.53■□□□□ 0.08
CCDC40-210ENST00000573903 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-210ENST00000573903 DACT2Q5SW24 774 aa15.52■□□□□ 0.08
CCDC40-210ENST00000573903 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-210ENST00000573903 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.07
CCDC40-210ENST00000573903 ANKRD18BA2A2Z9 1011 aa15.51■□□□□ 0.07
CCDC40-210ENST00000573903 TRPA1O75762 1119 aa15.51■□□□□ 0.07
CCDC40-210ENST00000573903 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-210ENST00000573903 RASAL3Q86YV0 1011 aa15.51■□□□□ 0.07
CCDC40-210ENST00000573903 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
CCDC40-210ENST00000573903 WTIPA6NIX2 430 aaPredicted RBP15.5■□□□□ 0.07
CCDC40-210ENST00000573903 NBPF9Q3BBW0 867 aa15.5■□□□□ 0.07
CCDC40-210ENST00000573903 TTLL5Q6EMB2 1281 aa15.5■□□□□ 0.07
CCDC40-210ENST00000573903 MXD3Q9BW11 206 aa15.5■□□□□ 0.07
CCDC40-210ENST00000573903 RNF186Q9NXI6 227 aa15.5■□□□□ 0.07
CCDC40-210ENST00000573903 CHMP3Q9Y3E7 222 aa15.5■□□□□ 0.07
CCDC40-210ENST00000573903 WNT10BO00744 389 aa15.49■□□□□ 0.07
CCDC40-210ENST00000573903 CSF1RP07333 972 aa15.49■□□□□ 0.07
CCDC40-210ENST00000573903 CASP7P55210 303 aa15.49■□□□□ 0.07
CCDC40-210ENST00000573903 CHRNDQ07001 517 aa15.49■□□□□ 0.07
CCDC40-210ENST00000573903 IFIT5Q13325 482 aaKnown RBP15.49■□□□□ 0.07
CCDC40-210ENST00000573903 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
CCDC40-210ENST00000573903 APOBEC3FQ8IUX4 373 aaKnown RBP15.49■□□□□ 0.07
CCDC40-210ENST00000573903 CSRNP1Q96S65 589 aa15.49■□□□□ 0.07
CCDC40-210ENST00000573903 VAMP4O75379 141 aa15.48■□□□□ 0.07
CCDC40-210ENST00000573903 SASH1O94885 1247 aa15.48■□□□□ 0.07
CCDC40-210ENST00000573903 GTF2IP78347 998 aa15.48■□□□□ 0.07
CCDC40-210ENST00000573903 EXOSC9Q06265 439 aaKnown RBP15.48■□□□□ 0.07
CCDC40-210ENST00000573903 KIAA0825Q8IV33 1275 aa15.48■□□□□ 0.07
CCDC40-210ENST00000573903 SCAF8Q9UPN6 1271 aaKnown RBP15.48■□□□□ 0.07
CCDC40-210ENST00000573903 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
CCDC40-210ENST00000573903 KLRK1P26718 216 aa15.47■□□□□ 0.07
CCDC40-210ENST00000573903 TAF7LQ5H9L4 462 aa15.47■□□□□ 0.07
CCDC40-210ENST00000573903 PRAMEF18Q5VWM3 479 aa15.47■□□□□ 0.07
CCDC40-210ENST00000573903 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
CCDC40-210ENST00000573903 ZNF804AQ7Z570 1209 aa15.47■□□□□ 0.07
CCDC40-210ENST00000573903 COL1A1P02452 1464 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-210ENST00000573903 UBE2Q2LH0YL09 131 aa15.46■□□□□ 0.07
CCDC40-210ENST00000573903 RGS19P49795 217 aa15.46■□□□□ 0.07
CCDC40-210ENST00000573903 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.07
CCDC40-210ENST00000573903 MOB2Q70IA6 237 aa15.46■□□□□ 0.07
CCDC40-210ENST00000573903 CD209Q9NNX6 404 aa15.46■□□□□ 0.07
CCDC40-210ENST00000573903 ECM29Q5VYK3 1845 aa15.45■□□□□ 0.06
CCDC40-210ENST00000573903 F6X3S4 739 aa15.45■□□□□ 0.06
CCDC40-210ENST00000573903 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
CCDC40-210ENST00000573903 BEND3Q5T5X7 828 aa15.45■□□□□ 0.06
CCDC40-210ENST00000573903 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-210ENST00000573903 GRM8O00222 908 aa15.44■□□□□ 0.06
CCDC40-210ENST00000573903 MYO1BO43795 1136 aa15.44■□□□□ 0.06
CCDC40-210ENST00000573903 TAF5LO75529 589 aa15.44■□□□□ 0.06
CCDC40-210ENST00000573903 FOXO4P98177 505 aa15.44■□□□□ 0.06
CCDC40-210ENST00000573903 SREBF2Q12772 1141 aa15.44■□□□□ 0.06
CCDC40-210ENST00000573903 CTU1Q7Z7A3 348 aaKnown RBP15.44■□□□□ 0.06
CCDC40-210ENST00000573903 HELBQ8NG08 1087 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-210ENST00000573903 CNNM1Q9NRU3 951 aa15.44■□□□□ 0.06
CCDC40-210ENST00000573903 PRKG1Q13976 671 aa15.43■□□□□ 0.06
CCDC40-210ENST00000573903 LMBR1LQ6UX01 489 aa15.43■□□□□ 0.06
CCDC40-210ENST00000573903 LDHAL6AQ6ZMR3 332 aa15.43■□□□□ 0.06
CCDC40-210ENST00000573903 C15orf52Q6ZUT6 534 aaKnown RBP15.43■□□□□ 0.06
CCDC40-210ENST00000573903 PLIN1O60240 522 aa15.42■□□□□ 0.06
CCDC40-210ENST00000573903 MKRN3Q13064 507 aaKnown RBP15.42■□□□□ 0.06
CCDC40-210ENST00000573903 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
CCDC40-210ENST00000573903 FAM9BQ8IZU0 186 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms