RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 MCOLN1Q9GZU1 580 aa28.19■■■□□ 2.1
SNF8-216ENST00000573795 PAPPA2Q9BXP8 1791 aa28.19■■■□□ 2.1
SNF8-216ENST00000573795 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 SLC10A3P09131 477 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 ZNF157P51786 506 aaPredicted RBP28.18■■■□□ 2.1
SNF8-216ENST00000573795 KIF23Q02241 960 aaPredicted RBP28.18■■■□□ 2.1
SNF8-216ENST00000573795 FLIIQ13045 1269 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 GCKRQ14397 625 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 NCBP3Q53F19 620 aaKnown RBP28.18■■■□□ 2.1
SNF8-216ENST00000573795 DACT2Q5SW24 774 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 TXNRD3Q86VQ6 643 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 CCDC102AQ96A19 550 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 MXD3Q9BW11 206 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 PITPNM2Q9BZ72 1349 aa28.18■■■□□ 2.1
SNF8-216ENST00000573795 AKAP11Q9UKA4 1901 aa28.16■■■□□ 2.1
SNF8-216ENST00000573795 CCDC85CA6NKD9 419 aa28.16■■■□□ 2.1
SNF8-216ENST00000573795 FAM161AQ3B820 660 aa28.16■■■□□ 2.1
SNF8-216ENST00000573795 SCAF8Q9UPN6 1271 aaKnown RBP28.16■■■□□ 2.1
SNF8-216ENST00000573795 A0A1B0GUL6 1792 aa28.16■■■□□ 2.1
SNF8-216ENST00000573795 KLRK1P26718 216 aa28.15■■■□□ 2.1
SNF8-216ENST00000573795 CSF1RP07333 972 aa28.14■■■□□ 2.1
SNF8-216ENST00000573795 ITGA6P23229 1130 aa28.14■■■□□ 2.1
SNF8-216ENST00000573795 NBPF9Q3BBW0 867 aa28.14■■■□□ 2.1
SNF8-216ENST00000573795 SAGE1Q9NXZ1 904 aa28.14■■■□□ 2.1
SNF8-216ENST00000573795 IGHMBP2P38935 993 aaKnown RBP28.13■■■□□ 2.09
SNF8-216ENST00000573795 RASAL3Q86YV0 1011 aa28.13■■■□□ 2.09
SNF8-216ENST00000573795 DNAAF4Q8WXU2 420 aa28.13■■■□□ 2.09
SNF8-216ENST00000573795 COA1Q9GZY4 146 aa28.13■■■□□ 2.09
SNF8-216ENST00000573795 LEMD3Q9Y2U8 911 aa28.13■■■□□ 2.09
SNF8-216ENST00000573795 VAMP4O75379 141 aa28.12■■■□□ 2.09
SNF8-216ENST00000573795 FKBP5Q13451 457 aaPredicted RBP28.12■■■□□ 2.09
SNF8-216ENST00000573795 STRIP1Q5VSL9 837 aa28.12■■■□□ 2.09
SNF8-216ENST00000573795 CSRNP1Q96S65 589 aa28.12■■■□□ 2.09
SNF8-216ENST00000573795 RNF186Q9NXI6 227 aa28.12■■■□□ 2.09
SNF8-216ENST00000573795 DGKZQ13574 1117 aa28.11■■■□□ 2.09
SNF8-216ENST00000573795 MOB2Q70IA6 237 aa28.11■■■□□ 2.09
SNF8-216ENST00000573795 LINS1Q8NG48 757 aa28.11■■■□□ 2.09
SNF8-216ENST00000573795 ZNF804BA4D1E1 1349 aa28.11■■■□□ 2.09
SNF8-216ENST00000573795 RGS19P49795 217 aa28.1■■■□□ 2.09
SNF8-216ENST00000573795 FKBP1BP68106 108 aa28.1■■■□□ 2.09
SNF8-216ENST00000573795 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
SNF8-216ENST00000573795 MRS2Q9HD23 443 aa28.1■■■□□ 2.09
SNF8-216ENST00000573795 WNT10BO00744 389 aa28.09■■■□□ 2.09
SNF8-216ENST00000573795 PRAMEF18Q5VWM3 479 aa28.09■■■□□ 2.09
SNF8-216ENST00000573795 FBXW7Q969H0 707 aa28.09■■■□□ 2.09
SNF8-216ENST00000573795 MYO3BQ8WXR4 1341 aa28.09■■■□□ 2.09
SNF8-216ENST00000573795 IRS2Q9Y4H2 1338 aa28.09■■■□□ 2.09
SNF8-216ENST00000573795 TRPA1O75762 1119 aa28.08■■■□□ 2.09
SNF8-216ENST00000573795 EXOSC9Q06265 439 aaKnown RBP28.08■■■□□ 2.09
SNF8-216ENST00000573795 ANKRD2Q9GZV1 360 aa28.08■■■□□ 2.09
SNF8-216ENST00000573795 CHRNDQ07001 517 aa28.07■■■□□ 2.08
SNF8-216ENST00000573795 WDR63Q8IWG1 891 aa28.07■■■□□ 2.08
SNF8-216ENST00000573795 MPHOSPH8Q99549 860 aa28.07■■■□□ 2.08
SNF8-216ENST00000573795 SALL2Q9Y467 1007 aaPredicted RBP28.07■■■□□ 2.08
SNF8-216ENST00000573795 SASH1O94885 1247 aa28.06■■■□□ 2.08
SNF8-216ENST00000573795 SPINK5Q9NQ38 1064 aaPredicted RBP28.06■■■□□ 2.08
SNF8-216ENST00000573795 SNAP23O00161 211 aa28.05■■■□□ 2.08
SNF8-216ENST00000573795 FOXO4P98177 505 aa28.05■■■□□ 2.08
SNF8-216ENST00000573795 TTLL5Q6EMB2 1281 aa28.05■■■□□ 2.08
SNF8-216ENST00000573795 OGFOD1Q8N543 542 aa28.05■■■□□ 2.08
SNF8-216ENST00000573795 F6X3S4 739 aa28.04■■■□□ 2.08
SNF8-216ENST00000573795 UBE2Q2LH0YL09 131 aa28.04■■■□□ 2.08
SNF8-216ENST00000573795 ZBED3Q96IU2 234 aaPredicted RBP28.04■■■□□ 2.08
SNF8-216ENST00000573795 BEND3Q5T5X7 828 aa28.03■■■□□ 2.08
SNF8-216ENST00000573795 KIAA0825Q8IV33 1275 aa28.03■■■□□ 2.08
SNF8-216ENST00000573795 ANKRD18BA2A2Z9 1011 aa28.02■■■□□ 2.08
SNF8-216ENST00000573795 TNRC18O15417 2968 aaPredicted RBP28.02■■■□□ 2.08
SNF8-216ENST00000573795 GTF2IP78347 998 aa28.02■■■□□ 2.08
SNF8-216ENST00000573795 CD209Q9NNX6 404 aa28.02■■■□□ 2.08
SNF8-216ENST00000573795 TAF5LO75529 589 aa28.01■■■□□ 2.07
SNF8-216ENST00000573795 MLLT1Q03111 559 aaPredicted RBP28.01■■■□□ 2.07
SNF8-216ENST00000573795 REM2Q8IYK8 340 aaPredicted RBP28.01■■■□□ 2.07
SNF8-216ENST00000573795 ECM29Q5VYK3 1845 aa28■■■□□ 2.07
SNF8-216ENST00000573795 MMP14P50281 582 aa28■■■□□ 2.07
SNF8-216ENST00000573795 EPHA10Q5JZY3 1008 aa28■■■□□ 2.07
SNF8-216ENST00000573795 C15orf52Q6ZUT6 534 aaKnown RBP28■■■□□ 2.07
SNF8-216ENST00000573795 CERS5Q8N5B7 392 aa28■■■□□ 2.07
SNF8-216ENST00000573795 HELBQ8NG08 1087 aaPredicted RBP28■■■□□ 2.07
SNF8-216ENST00000573795 KCNJ4P48050 445 aa27.99■■■□□ 2.07
SNF8-216ENST00000573795 IFIT5Q13325 482 aaKnown RBP27.98■■■□□ 2.07
SNF8-216ENST00000573795 ANP32CO43423 234 aa27.97■■■□□ 2.07
SNF8-216ENST00000573795 HDAC9Q9UKV0 1011 aa27.97■■■□□ 2.07
SNF8-216ENST00000573795 TTLL12Q14166 644 aaPredicted RBP27.96■■■□□ 2.07
SNF8-216ENST00000573795 LMBR1LQ6UX01 489 aa27.96■■■□□ 2.07
SNF8-216ENST00000573795 APOBEC3FQ8IUX4 373 aaKnown RBP27.96■■■□□ 2.07
SNF8-216ENST00000573795 ZNF594Q96JF6 807 aaPredicted RBP27.95■■■□□ 2.06
SNF8-216ENST00000573795 CHMP3Q9Y3E7 222 aa27.95■■■□□ 2.06
SNF8-216ENST00000573795 PCDHAC2Q9Y5I4 1007 aa27.95■■■□□ 2.06
SNF8-216ENST00000573795 COL1A1P02452 1464 aaPredicted RBP27.95■■■□□ 2.06
SNF8-216ENST00000573795 IL1R1P14778 569 aa27.94■■■□□ 2.06
SNF8-216ENST00000573795 NF2P35240 595 aa27.94■■■□□ 2.06
SNF8-216ENST00000573795 PTPN12Q05209 780 aaKnown RBP27.94■■■□□ 2.06
SNF8-216ENST00000573795 SSC5DA1L4H1 1573 aa27.94■■■□□ 2.06
SNF8-216ENST00000573795 GRM8O00222 908 aa27.93■■■□□ 2.06
SNF8-216ENST00000573795 CTU1Q7Z7A3 348 aaKnown RBP27.93■■■□□ 2.06
SNF8-216ENST00000573795 MTMR14Q8NCE2 650 aa27.93■■■□□ 2.06
SNF8-216ENST00000573795 TM4SF4P48230 202 aa27.92■■■□□ 2.06
SNF8-216ENST00000573795 PRKG1Q13976 671 aa27.92■■■□□ 2.06
SNF8-216ENST00000573795 FZD1Q9UP38 647 aa27.92■■■□□ 2.06
SNF8-216ENST00000573795 AOX1Q06278 1338 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms