RNA–Protein interactions for RNA: ENST00000573005.1

SIAH1-208, Transcript of siah E3 ubiquitin protein ligase 1, human

TSL 3

Gene SIAH1, Length 705 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIAH1-208	ENST00000573005	NLRP3	Q96P20	1036 aa		11.26	□□□□□ -0.61
SIAH1-208	ENST00000573005	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.26	□□□□□ -0.61
SIAH1-208	ENST00000573005	GREM2	Q9H772	168 aa		11.26	□□□□□ -0.61
SIAH1-208	ENST00000573005	COPRS	Q9NQ92	184 aa		11.26	□□□□□ -0.61
SIAH1-208	ENST00000573005	HMMR	O75330	724 aa		11.25	□□□□□ -0.61
SIAH1-208	ENST00000573005	HOXA10	P31260	410 aa	Predicted RBP	11.25	□□□□□ -0.61
SIAH1-208	ENST00000573005	SCNN1D	P51172	638 aa		11.25	□□□□□ -0.61
SIAH1-208	ENST00000573005	ANKRD31	Q8N7Z5	1873 aa		11.25	□□□□□ -0.61
SIAH1-208	ENST00000573005	TRPA1	O75762	1119 aa		11.24	□□□□□ -0.61
SIAH1-208	ENST00000573005	ITGA6	P23229	1130 aa		11.24	□□□□□ -0.61
SIAH1-208	ENST00000573005	NOG	Q13253	232 aa		11.24	□□□□□ -0.61
SIAH1-208	ENST00000573005	CCDC152	Q4G0S7	254 aa		11.24	□□□□□ -0.61
SIAH1-208	ENST00000573005	USP50	Q70EL3	339 aa	Predicted RBP	11.24	□□□□□ -0.61
SIAH1-208	ENST00000573005	RTKN2	Q8IZC4	609 aa		11.24	□□□□□ -0.61
SIAH1-208	ENST00000573005	NPR1	P16066	1061 aa		11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	IFIT5	Q13325	482 aa	Known RBP	11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	CCDC57	Q2TAC2	916 aa		11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	ATG9A	Q7Z3C6	839 aa		11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	KLHDC4	Q8TBB5	520 aa		11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	SEC31B	Q9NQW1	1179 aa		11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	HPS5	Q9UPZ3	1129 aa		11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	PA2G4	Q9UQ80	394 aa	Known RBP	11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	DDX60	Q8IY21	1712 aa	Known RBP	11.23	□□□□□ -0.61
SIAH1-208	ENST00000573005	ANKRD18B	A2A2Z9	1011 aa		11.22	□□□□□ -0.61
SIAH1-208	ENST00000573005	SURF6	O75683	361 aa	Known RBP	11.22	□□□□□ -0.61
SIAH1-208	ENST00000573005	ZNF594	Q96JF6	807 aa	Predicted RBP	11.22	□□□□□ -0.61
SIAH1-208	ENST00000573005	FBXO3	Q9UK99	471 aa		11.22	□□□□□ -0.61
SIAH1-208	ENST00000573005	RIPOR2	Q9Y4F9	1068 aa		11.22	□□□□□ -0.61
SIAH1-208	ENST00000573005	CACNA1S	Q13698	1873 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	MKI67	P46013	3256 aa	Known RBP	11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	EYA2	O00167	538 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	DLL1	O00548	723 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	RAB11FIP3	O75154	756 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	CIAO1	O76071	339 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	SASH1	O94885	1247 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	HUNK	P57058	714 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	RPS8	P62241	208 aa	Known RBP	11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	CTU1	Q7Z7A3	348 aa	Known RBP	11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	HHIPL1	Q96JK4	782 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	CRAMP1	Q96RY5	1269 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	PUS3	Q9BZE2	481 aa	Known RBP	11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	RNF186	Q9NXI6	227 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	EXOC6B	Q9Y2D4	811 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	CHMP3	Q9Y3E7	222 aa		11.21	□□□□□ -0.61
SIAH1-208	ENST00000573005	FXR1	P51114	621 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	KIF23	Q02241	960 aa	Predicted RBP	11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	NUCB1	Q02818	461 aa		11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	LRRC24	Q50LG9	513 aa		11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	HSP90AB4P	Q58FF6	505 aa		11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	DLK2	Q6UY11	383 aa		11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	LARGE2	Q8N3Y3	721 aa		11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	CELF1	Q92879	486 aa	Known RBP	11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	BSDC1	Q9NW68	430 aa	Predicted RBP	11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	LAMB2	P55268	1798 aa		11.2	□□□□□ -0.62
SIAH1-208	ENST00000573005	IL15	P40933	162 aa	Predicted RBP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	GRAP	Q13588	217 aa		11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	LDHAL6A	Q6ZMR3	332 aa		11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	DDX46	Q7L014	1031 aa	Known RBP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	GRAPL	Q8TC17	118 aa	Predicted RBP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	RHPN1	Q8TCX5	695 aa		11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	RBM17	Q96I25	401 aa	Known RBP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	CDC5L	Q99459	802 aa	Known RBP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	SIL1	Q9H173	461 aa		11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	ADARB2	Q9NS39	739 aa	Known RBP	11.19	□□□□□ -0.62
SIAH1-208	ENST00000573005	COL4A1	P02462	1669 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	COL4A5	P29400	1685 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	BBOX1	O75936	387 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	ANKRD45	Q5TZF3	282 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	ERC1	Q8IUD2	1116 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	ANKRD18A	Q8IVF6	992 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	VGLL2	Q8N8G2	317 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	RPGR	Q92834	1020 aa	Known RBP	11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	SAGE1	Q9NXZ1	904 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	GPRC5D	Q9NZD1	345 aa		11.18	□□□□□ -0.62
SIAH1-208	ENST00000573005	FAM155A	B1AL88	458 aa	Predicted RBP	11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	SMARCA5	O60264	1052 aa	Predicted RBP	11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	ALDH1B1	P30837	517 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	IGHMBP2	P38935	993 aa	Known RBP	11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	TFCP2	Q12800	502 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	TAF7L	Q5H9L4	462 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	USP48	Q86UV5	1035 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	SLC51A	Q86UW1	340 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	CHD1L	Q86WJ1	897 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	NIM1K	Q8IY84	436 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	KIF1BP	Q96EK5	621 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	PSMD1	Q99460	953 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	LRRCC1	Q9C099	1032 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	GPR108	Q9NPR9	543 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	HDAC9	Q9UKV0	1011 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	MINPP1	Q9UNW1	487 aa		11.17	□□□□□ -0.62
SIAH1-208	ENST00000573005	PDE4A	P27815	886 aa		11.16	□□□□□ -0.62
SIAH1-208	ENST00000573005	GMPS	P49915	693 aa	Predicted RBP	11.16	□□□□□ -0.62
SIAH1-208	ENST00000573005	ZNF157	P51786	506 aa	Predicted RBP	11.16	□□□□□ -0.62
SIAH1-208	ENST00000573005	RGMB	Q6NW40	437 aa		11.16	□□□□□ -0.62
SIAH1-208	ENST00000573005	MPHOSPH8	Q99549	860 aa		11.16	□□□□□ -0.62
SIAH1-208	ENST00000573005	TRPM7	Q96QT4	1865 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms