RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 F2P00734 622 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 NBPF7P0C2Y1 421 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 MYCLP1P12525 358 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 HTR3AP46098 478 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 GUCY2FP51841 1108 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 PICALMQ13492 652 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 MLC1Q15049 377 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 SLC4A8Q2Y0W8 1093 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 NBPF1Q3BBV0 1214 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 HYIQ5T013 277 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 MEI1Q5TIA1 1274 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 ANO1Q5XXA6 986 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 PDXDC2PQ6P474 469 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 ZNF354CQ86Y25 554 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 ABTB2Q8N961 1025 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 JMYQ8N9B5 988 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 TATDN2Q93075 761 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 NUDT16Q96DE0 195 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 ANAPC16Q96DE5 110 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 CAMKK2Q96RR4 588 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 HERPUD2Q9BSE4 406 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 CLIC5Q9NZA1 410 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 USP25Q9UHP3 1055 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 PNMA3Q9UL41 463 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 CD2APQ9Y5K6 639 aa6.18□□□□□ -1.42
TOPBP1-210ENST00000572787 CLGNO14967 610 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 RAPGEF3O95398 923 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 DDIT3P35638 169 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 USP4Q13107 963 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 PWP1Q13610 501 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 DDR2Q16832 855 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 Q3C1V9 767 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 ALDH1L2Q3SY69 923 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 PPP4R3BQ5MIZ7 849 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM102BQ5T8I3 360 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 KANK3Q6NY19 840 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 ZSCAN30Q86W11 494 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 MSL3Q8N5Y2 521 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 ATL2Q8NHH9 583 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 GAS2L2Q8NHY3 880 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 GPKOWQ92917 476 aaPredicted RBP eCLIP6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 GPR101Q96P66 508 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 SAP130Q9H0E3 1048 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 CDH19Q9H159 772 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 STRN4Q9NRL3 753 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 ATG3Q9NT62 314 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 KBTBD4Q9NVX7 518 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 CWC25Q9NXE8 425 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 PUF60Q9UHX1 559 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 FEZ2Q9UHY8 353 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 DAAM1Q9Y4D1 1078 aa6.17□□□□□ -1.42
TOPBP1-210ENST00000572787 EIF1AYO14602 144 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM200BP0CF97 657 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 SRGNP10124 158 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 TRIM27P14373 513 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 SARSP49591 514 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 PIN1Q13526 163 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 ANKRD23Q86SG2 305 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 SUGP1Q8IWZ8 645 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 NIM1KQ8IY84 436 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 NKX2-3Q8TAU0 364 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 NINJ1Q92982 152 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 SKA1Q96BD8 255 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 RSRP1Q9BUV0 290 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 C2orf49Q9BVC5 232 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 ASPSCR1Q9BZE9 553 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 LRRC27Q9C0I9 530 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 RETREG1Q9H6L5 497 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM8A1Q9UBU6 413 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 EVLQ9UI08 416 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 HDAC9Q9UKV0 1011 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 POLIQ9UNA4 740 aa6.16□□□□□ -1.42
TOPBP1-210ENST00000572787 SMAD7O15105 426 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 F12P00748 615 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 SLC10A3P09131 477 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 RBP3P10745 1247 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 CPEP16870 476 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 APOBRQ0VD83 1088 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 PUM3Q15397 648 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 LONRF1Q17RB8 773 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 MTERF2Q49AM1 385 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 CCDC92Q53HC0 331 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM133BQ5BKY9 247 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 MMS22LQ6ZRQ5 1243 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 PASD1Q8IV76 773 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 CELF2-AS1Q8N7Q2 184 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 MAGEB6Q8N7X4 407 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 ARMC2Q8NEN0 867 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 SCG3Q8WXD2 468 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 MPP4Q96JB8 637 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 SCLT1Q96NL6 688 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 CSRNP2Q9H175 543 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 ADAMTS1Q9UHI8 967 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 TSKSQ9UJT2 592 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 PTCH2Q9Y6C5 1203 aa6.15□□□□□ -1.42
TOPBP1-210ENST00000572787 RASSF10A6NK89 507 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms