RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 SERPINB2P05120 415 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 IL27Q8NEV9 243 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 KCNB2Q92953 911 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 RBM8AQ9Y5S9 174 aaKnown RBP24.72■■□□□ 1.55
CHRNE-202ENST00000572438 NEK4P51957 841 aa24.71■■□□□ 1.55
CHRNE-202ENST00000572438 SPRYD3Q8NCJ5 442 aa24.71■■□□□ 1.55
CHRNE-202ENST00000572438 SEC62Q99442 399 aaKnown RBP24.71■■□□□ 1.55
CHRNE-202ENST00000572438 ZFYP08048 801 aaPredicted RBP24.7■■□□□ 1.55
CHRNE-202ENST00000572438 NECTIN1Q15223 517 aa24.7■■□□□ 1.55
CHRNE-202ENST00000572438 PRPF40BQ6NWY9 871 aaKnown RBP24.7■■□□□ 1.55
CHRNE-202ENST00000572438 RASEFQ8IZ41 740 aa24.7■■□□□ 1.55
CHRNE-202ENST00000572438 KCNJ4P48050 445 aa24.7■■□□□ 1.54
CHRNE-202ENST00000572438 ST5P78524 1137 aa24.7■■□□□ 1.54
CHRNE-202ENST00000572438 UBE4AQ14139 1066 aa24.7■■□□□ 1.54
CHRNE-202ENST00000572438 TTF1Q15361 905 aaPredicted RBP24.7■■□□□ 1.54
CHRNE-202ENST00000572438 FLAD1Q8NFF5 587 aa24.7■■□□□ 1.54
CHRNE-202ENST00000572438 RGPD3A6NKT7 1758 aaPredicted RBP24.7■■□□□ 1.54
CHRNE-202ENST00000572438 RGPD4Q7Z3J3 1758 aa24.7■■□□□ 1.54
CHRNE-202ENST00000572438 DDR1Q08345 913 aa24.69■■□□□ 1.54
CHRNE-202ENST00000572438 CCDC129Q6ZRS4 1044 aa24.68■■□□□ 1.54
CHRNE-202ENST00000572438 COL23A1Q86Y22 540 aaPredicted RBP24.68■■□□□ 1.54
CHRNE-202ENST00000572438 AKAP11Q9UKA4 1901 aa24.68■■□□□ 1.54
CHRNE-202ENST00000572438 POLRMTO00411 1230 aaKnown RBP24.68■■□□□ 1.54
CHRNE-202ENST00000572438 CYP2E1P05181 493 aaPredicted RBP24.68■■□□□ 1.54
CHRNE-202ENST00000572438 HMG20BQ9P0W2 317 aa24.68■■□□□ 1.54
CHRNE-202ENST00000572438 TAF1P21675 1872 aa24.68■■□□□ 1.54
CHRNE-202ENST00000572438 SLFNL1Q499Z3 407 aa24.67■■□□□ 1.54
CHRNE-202ENST00000572438 CREB3L3Q68CJ9 461 aa24.67■■□□□ 1.54
CHRNE-202ENST00000572438 SPATA5Q8NB90 893 aa24.67■■□□□ 1.54
CHRNE-202ENST00000572438 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.67■■□□□ 1.54
CHRNE-202ENST00000572438 ANKRD2Q9GZV1 360 aa24.67■■□□□ 1.54
CHRNE-202ENST00000572438 ZKSCAN1P17029 563 aaPredicted RBP24.66■■□□□ 1.54
CHRNE-202ENST00000572438 MCM2P49736 904 aa24.66■■□□□ 1.54
CHRNE-202ENST00000572438 BCAMP50895 628 aa24.66■■□□□ 1.54
CHRNE-202ENST00000572438 RASGRF1Q13972 1273 aa24.66■■□□□ 1.54
CHRNE-202ENST00000572438 ANP32EQ9BTT0 268 aa24.66■■□□□ 1.54
CHRNE-202ENST00000572438 UPF3BQ9BZI7 483 aaKnown RBP24.66■■□□□ 1.54
CHRNE-202ENST00000572438 A0A1B0GUL6 1792 aa24.66■■□□□ 1.54
CHRNE-202ENST00000572438 MAST3O60307 1309 aa24.66■■□□□ 1.54
CHRNE-202ENST00000572438 GRAPQ13588 217 aa24.65■■□□□ 1.54
CHRNE-202ENST00000572438 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
CHRNE-202ENST00000572438 ZSCAN25Q6NSZ9 544 aa24.65■■□□□ 1.54
CHRNE-202ENST00000572438 NLGN1Q8N2Q7 840 aa24.65■■□□□ 1.54
CHRNE-202ENST00000572438 GRAPLQ8TC17 118 aaPredicted RBP24.65■■□□□ 1.54
CHRNE-202ENST00000572438 PIH1D3Q9NQM4 214 aaKnown RBP24.65■■□□□ 1.54
CHRNE-202ENST00000572438 SLC27A2O14975 620 aa24.65■■□□□ 1.54
CHRNE-202ENST00000572438 CRY2Q49AN0 593 aa24.65■■□□□ 1.54
CHRNE-202ENST00000572438 HSP90AA1P07900 732 aaKnown RBP24.64■■□□□ 1.54
CHRNE-202ENST00000572438 TM6SF1Q9BZW5 370 aa24.64■■□□□ 1.54
CHRNE-202ENST00000572438 U3KPZ7 1027 aaPredicted RBP24.64■■□□□ 1.54
CHRNE-202ENST00000572438 APPBP2Q92624 585 aa24.63■■□□□ 1.53
CHRNE-202ENST00000572438 OSBP2Q969R2 916 aa24.63■■□□□ 1.53
CHRNE-202ENST00000572438 ZNF804BA4D1E1 1349 aa24.63■■□□□ 1.53
CHRNE-202ENST00000572438 WASHC4Q2M389 1173 aa24.63■■□□□ 1.53
CHRNE-202ENST00000572438 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
CHRNE-202ENST00000572438 M0R2C6 588 aa24.62■■□□□ 1.53
CHRNE-202ENST00000572438 DDIT3P35638 169 aa24.62■■□□□ 1.53
CHRNE-202ENST00000572438 DSCC1Q9BVC3 393 aa24.62■■□□□ 1.53
CHRNE-202ENST00000572438 PNPLA7Q6ZV29 1317 aa24.62■■□□□ 1.53
CHRNE-202ENST00000572438 WTIPA6NIX2 430 aaPredicted RBP24.61■■□□□ 1.53
CHRNE-202ENST00000572438 ADD2P35612 726 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 CAVIN4Q5BKX8 364 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 JAKMIP1Q96N16 626 aaKnown RBP24.61■■□□□ 1.53
CHRNE-202ENST00000572438 CAMKK2Q96RR4 588 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 GNL3LQ9NVN8 582 aaKnown RBP24.61■■□□□ 1.53
CHRNE-202ENST00000572438 IDH1O75874 414 aaKnown RBP24.61■■□□□ 1.53
CHRNE-202ENST00000572438 GYG1P46976 350 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 TSGA10IPQ3SY00 556 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 SLC9C2Q5TAH2 1124 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 CHMP5Q9NZZ3 219 aa24.61■■□□□ 1.53
CHRNE-202ENST00000572438 CASTP20810 708 aaKnown RBP24.6■■□□□ 1.53
CHRNE-202ENST00000572438 UBE3CQ15386 1083 aa24.6■■□□□ 1.53
CHRNE-202ENST00000572438 ADCK5Q3MIX3 580 aa24.6■■□□□ 1.53
CHRNE-202ENST00000572438 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
CHRNE-202ENST00000572438 ZSWIM6Q9HCJ5 1215 aa24.6■■□□□ 1.53
CHRNE-202ENST00000572438 KLRG2A4D1S0 409 aaPredicted RBP24.59■■□□□ 1.53
CHRNE-202ENST00000572438 TTC14Q96N46 770 aa24.59■■□□□ 1.53
CHRNE-202ENST00000572438 RPAP1Q9BWH6 1393 aaPredicted RBP24.59■■□□□ 1.53
CHRNE-202ENST00000572438 HSPD1P10809 573 aaKnown RBP24.58■■□□□ 1.53
CHRNE-202ENST00000572438 PSMA5P28066 241 aa24.58■■□□□ 1.53
CHRNE-202ENST00000572438 EN1Q05925 392 aaPredicted RBP24.58■■□□□ 1.53
CHRNE-202ENST00000572438 EZH2Q15910 746 aaKnown RBP24.58■■□□□ 1.53
CHRNE-202ENST00000572438 VPS53Q5VIR6 699 aa24.58■■□□□ 1.53
CHRNE-202ENST00000572438 FAM84BQ96KN1 310 aaPredicted RBP24.58■■□□□ 1.53
CHRNE-202ENST00000572438 PDE6AP16499 860 aa24.58■■□□□ 1.53
CHRNE-202ENST00000572438 TMX3Q96JJ7 454 aa24.58■■□□□ 1.53
CHRNE-202ENST00000572438 PUS7LQ9H0K6 701 aaKnown RBP24.58■■□□□ 1.53
CHRNE-202ENST00000572438 CYP46A1Q9Y6A2 500 aa24.58■■□□□ 1.53
CHRNE-202ENST00000572438 HOXA10P31260 410 aaPredicted RBP24.57■■□□□ 1.52
CHRNE-202ENST00000572438 MAP3K12Q12852 859 aa24.57■■□□□ 1.52
CHRNE-202ENST00000572438 FBXO33Q7Z6M2 555 aa24.57■■□□□ 1.52
CHRNE-202ENST00000572438 VPS37DQ86XT2 251 aa24.57■■□□□ 1.52
CHRNE-202ENST00000572438 FOXD4L1Q9NU39 408 aa24.57■■□□□ 1.52
CHRNE-202ENST00000572438 CIZ1Q9ULV3 898 aaPredicted RBP24.57■■□□□ 1.52
CHRNE-202ENST00000572438 KRT32Q14532 448 aa24.56■■□□□ 1.52
CHRNE-202ENST00000572438 RUFY3Q7L099 469 aa24.56■■□□□ 1.52
CHRNE-202ENST00000572438 WWC3Q9ULE0 1092 aa24.56■■□□□ 1.52
CHRNE-202ENST00000572438 MYH7P12883 1935 aa24.56■■□□□ 1.52
CHRNE-202ENST00000572438 ZNF532Q9HCE3 1301 aa24.56■■□□□ 1.52
CHRNE-202ENST00000572438 BRIP1Q9BX63 1249 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms