RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FOXO4P98177 505 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 WASHC4Q2M389 1173 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 ZKSCAN2Q63HK3 967 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 SUCLG2Q96I99 432 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 ZIC5Q96T25 663 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 EYA3Q99504 573 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 VPS33BQ9H267 617 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 TRAF5O00463 557 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 UFL1O94874 794 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 CSF1RP07333 972 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 UBTFL1P0CB47 393 aaPredicted RBP9.76□□□□□ -0.85
SMG6-211ENST00000572369 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 FTSJ3Q8IY81 847 aaKnown RBP9.76□□□□□ -0.85
SMG6-211ENST00000572369 OTUD5Q96G74 571 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 RTFDC1Q9BY42 306 aaPredicted RBP9.76□□□□□ -0.85
SMG6-211ENST00000572369 ZC3H12CQ9C0D7 883 aaKnown RBP9.76□□□□□ -0.85
SMG6-211ENST00000572369 BSDC1Q9NW68 430 aaPredicted RBP9.76□□□□□ -0.85
SMG6-211ENST00000572369 GGA1Q9UJY5 639 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 HDAC5Q9UQL6 1122 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 GJA3Q9Y6H8 435 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 XDHP47989 1333 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 ZNF541Q9H0D2 1346 aa9.76□□□□□ -0.85
SMG6-211ENST00000572369 SNED1Q8TER0 1413 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 TRIM27P14373 513 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 COL9A1P20849 921 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 KCNJ4P48050 445 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 TBC1D16Q8TBP0 767 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 USP44Q9H0E7 712 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 BICC1Q9H694 974 aaKnown RBP9.75□□□□□ -0.85
SMG6-211ENST00000572369 CNNM1Q9NRU3 951 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 UTYO14607 1347 aa9.75□□□□□ -0.85
SMG6-211ENST00000572369 PLIN1O60240 522 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 ATP2B4P23634 1241 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 PLA2G5P39877 138 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 KIAA2012Q0VF49 1180 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 LDHAL6AQ6ZMR3 332 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 ZNF594Q96JF6 807 aaPredicted RBP9.74□□□□□ -0.85
SMG6-211ENST00000572369 ANKRD2Q9GZV1 360 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 POLLQ9UGP5 575 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 ZNRF3Q9ULT6 936 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 MINPP1Q9UNW1 487 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
SMG6-211ENST00000572369 FZD9O00144 591 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 TRPA1O75762 1119 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 GNAI3P08754 354 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 LMOD1P29536 600 aaPredicted RBP9.73□□□□□ -0.85
SMG6-211ENST00000572369 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 INTS3Q68E01 1043 aaKnown RBP9.73□□□□□ -0.85
SMG6-211ENST00000572369 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 GPC2Q8N158 579 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 DBNDD1Q9H9R9 158 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 RNF186Q9NXI6 227 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
SMG6-211ENST00000572369 COL4A5P29400 1685 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 POTEFA5A3E0 1075 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 ECE2O60344 883 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 RAD17O75943 681 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 CELF2O95319 508 aaKnown RBP9.72□□□□□ -0.85
SMG6-211ENST00000572369 MS4A1P11836 297 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 CHRNDQ07001 517 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 TNIP1Q15025 636 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 ITPRIPQ8IWB1 547 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
SMG6-211ENST00000572369 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
SMG6-211ENST00000572369 MEIS3Q99687 375 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 LEMD3Q9Y2U8 911 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 LRRFIP2Q9Y608 721 aaKnown RBP9.72□□□□□ -0.85
SMG6-211ENST00000572369 A0A1B0GUL6 1792 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 CEP290O15078 2479 aa9.72□□□□□ -0.85
SMG6-211ENST00000572369 HTTP42858 3142 aa9.71□□□□□ -0.85
SMG6-211ENST00000572369 CACNA1AO00555 2505 aa9.71□□□□□ -0.85
SMG6-211ENST00000572369 TAF5LO75529 589 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 CXCL9Q07325 125 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 RABL6Q3YEC7 729 aaPredicted RBP9.71□□□□□ -0.86
SMG6-211ENST00000572369 FBXO46Q6PJ61 603 aaPredicted RBP9.71□□□□□ -0.86
SMG6-211ENST00000572369 TMEM57Q8N5G2 664 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 ANKRD44Q8N8A2 993 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 FBXW7Q969H0 707 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 KAZALD1Q96I82 304 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.86
SMG6-211ENST00000572369 ZNF804BA4D1E1 1349 aa9.71□□□□□ -0.86
SMG6-211ENST00000572369 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
SMG6-211ENST00000572369 H0YGN5 161 aa9.7□□□□□ -0.86
SMG6-211ENST00000572369 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
SMG6-211ENST00000572369 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.7□□□□□ -0.86
SMG6-211ENST00000572369 PUS3Q9BZE2 481 aaKnown RBP9.7□□□□□ -0.86
SMG6-211ENST00000572369 HDAC9Q9UKV0 1011 aa9.7□□□□□ -0.86
SMG6-211ENST00000572369 MED23Q9ULK4 1368 aa9.7□□□□□ -0.86
SMG6-211ENST00000572369 GNAI2P04899 355 aa9.69□□□□□ -0.86
SMG6-211ENST00000572369 METTL24Q5JXM2 366 aa9.69□□□□□ -0.86
SMG6-211ENST00000572369 MROH5Q6ZUA9 1318 aa9.69□□□□□ -0.86
SMG6-211ENST00000572369 FAM122AQ96E09 287 aa9.69□□□□□ -0.86
SMG6-211ENST00000572369 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
SMG6-211ENST00000572369 SIL1Q9H173 461 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms