RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ZNF646O15015 1829 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 ATF7IPQ6VMQ6 1270 aa12.87□□□□□ -0.35
GTF3C1-213ENST00000571886 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
GTF3C1-213ENST00000571886 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-213ENST00000571886 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
GTF3C1-213ENST00000571886 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-213ENST00000571886 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-213ENST00000571886 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-213ENST00000571886 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-213ENST00000571886 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
GTF3C1-213ENST00000571886 CNTROBQ8N137 903 aa12.86□□□□□ -0.35
GTF3C1-213ENST00000571886 DPF2Q92785 391 aa12.86□□□□□ -0.35
GTF3C1-213ENST00000571886 PASKQ96RG2 1323 aa12.86□□□□□ -0.35
GTF3C1-213ENST00000571886 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 RLBP1P12271 317 aa12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 KCNJ4P48050 445 aa12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 TMEM57Q8N5G2 664 aa12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 GMLQ99445 158 aa12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 COA1Q9GZY4 146 aa12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
GTF3C1-213ENST00000571886 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 H7C1D1 291 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-213ENST00000571886 TRAF5O00463 557 aa12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 GTF2IP78347 998 aa12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-213ENST00000571886 GYG1P46976 350 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 UBE4AQ14139 1066 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 METTL24Q5JXM2 366 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 AGBL3Q8NEM8 1001 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 GLIS2Q9BZE0 524 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
GTF3C1-213ENST00000571886 EYA2O00167 538 aa12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 IL1R1P14778 569 aa12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 CERS5Q8N5B7 392 aa12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 FAM84BQ96KN1 310 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 SIL1Q9H173 461 aa12.81□□□□□ -0.36
GTF3C1-213ENST00000571886 PDE8BO95263 885 aa12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 GNAI3P08754 354 aa12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 FGFR2P21802 821 aa12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 CST9Q5W186 159 aa12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
GTF3C1-213ENST00000571886 ZNF609O15014 1411 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 HIBADHP31937 336 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 FBXO33Q7Z6M2 555 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 IQSEC3Q9UPP2 1182 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 PCDHAC2Q9Y5I4 1007 aa12.79□□□□□ -0.36
GTF3C1-213ENST00000571886 TMEM88BA6NKF7 163 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 ZBTB7BO15156 539 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 BCAMP50895 628 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 SCARF1Q14162 830 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 ZNF804AQ7Z570 1209 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 COPRSQ9NQ92 184 aa12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-213ENST00000571886 ADM5C9JUS6 153 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 SASH1O94885 1247 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 GNAI2P04899 355 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 MTX1Q13505 466 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 GRIK5Q16478 980 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 RCAN3Q9UKA8 241 aa12.77□□□□□ -0.37
GTF3C1-213ENST00000571886 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms